Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.48■■■□□ 2.47
Col23a1Q8K4G2 Gm15039-201ENSMUST00000118914 875 ntBASIC30.48■■■□□ 2.47
Col23a1Q8K4G2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Col23a1Q8K4G2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Col23a1Q8K4G2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
Col23a1Q8K4G2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Col23a1Q8K4G2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Col23a1Q8K4G2 Particl-201ENSMUST00000205370 1560 ntBASIC30.45■■■□□ 2.46
Col23a1Q8K4G2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Col23a1Q8K4G2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC30.44■■■□□ 2.46
Col23a1Q8K4G2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
Col23a1Q8K4G2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Col23a1Q8K4G2 Gm4799-201ENSMUST00000095396 657 ntBASIC30.43■■■□□ 2.46
Col23a1Q8K4G2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
Col23a1Q8K4G2 Gm11687-201ENSMUST00000118911 886 ntBASIC30.42■■■□□ 2.46
Col23a1Q8K4G2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC30.42■■■□□ 2.46
Col23a1Q8K4G2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Col23a1Q8K4G2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Col23a1Q8K4G2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Col23a1Q8K4G2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.4■■■□□ 2.46
Col23a1Q8K4G2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Col23a1Q8K4G2 Gm9806-201ENSMUST00000051080 552 ntBASIC30.4■■■□□ 2.46
Col23a1Q8K4G2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Col23a1Q8K4G2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Col23a1Q8K4G2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Col23a1Q8K4G2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Col23a1Q8K4G2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Col23a1Q8K4G2 Gm16437-201ENSMUST00000025669 507 ntBASIC30.36■■■□□ 2.45
Col23a1Q8K4G2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Col23a1Q8K4G2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
Col23a1Q8K4G2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Col23a1Q8K4G2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Col23a1Q8K4G2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
Col23a1Q8K4G2 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.35■■■□□ 2.45
Col23a1Q8K4G2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Col23a1Q8K4G2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Col23a1Q8K4G2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Col23a1Q8K4G2 Gm30023-201ENSMUST00000197970 889 ntBASIC30.33■■■□□ 2.45
Col23a1Q8K4G2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Col23a1Q8K4G2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.32■■■□□ 2.44
Col23a1Q8K4G2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Col23a1Q8K4G2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Col23a1Q8K4G2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC30.3■■■□□ 2.44
Col23a1Q8K4G2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Col23a1Q8K4G2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Col23a1Q8K4G2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Col23a1Q8K4G2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Col23a1Q8K4G2 Gm7332-201ENSMUST00000118351 454 ntBASIC30.25■■■□□ 2.43
Col23a1Q8K4G2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Col23a1Q8K4G2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30.24■■■□□ 2.43
Col23a1Q8K4G2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Col23a1Q8K4G2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30.22■■■□□ 2.43
Col23a1Q8K4G2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.22■■■□□ 2.43
Col23a1Q8K4G2 Gm27502-201ENSMUST00000183495 199 ntBASIC30.22■■■□□ 2.43
Col23a1Q8K4G2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Col23a1Q8K4G2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Col23a1Q8K4G2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Col23a1Q8K4G2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.2■■■□□ 2.42
Col23a1Q8K4G2 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.18■■■□□ 2.42
Col23a1Q8K4G2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Col23a1Q8K4G2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Col23a1Q8K4G2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Col23a1Q8K4G2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Col23a1Q8K4G2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Col23a1Q8K4G2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Col23a1Q8K4G2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Col23a1Q8K4G2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Col23a1Q8K4G2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
Col23a1Q8K4G2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Col23a1Q8K4G2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Col23a1Q8K4G2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
Col23a1Q8K4G2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Col23a1Q8K4G2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Col23a1Q8K4G2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Col23a1Q8K4G2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Col23a1Q8K4G2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC30.1■■■□□ 2.41
Col23a1Q8K4G2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Col23a1Q8K4G2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Col23a1Q8K4G2 Gm22567-201ENSMUST00000175542 342 ntBASIC30.09■■■□□ 2.41
Col23a1Q8K4G2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC30.09■■■□□ 2.41
Col23a1Q8K4G2 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.08■■■□□ 2.41
Col23a1Q8K4G2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.08■■■□□ 2.41
Col23a1Q8K4G2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
Col23a1Q8K4G2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Col23a1Q8K4G2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Col23a1Q8K4G2 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.05■■■□□ 2.4
Col23a1Q8K4G2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Col23a1Q8K4G2 Mir3960-201ENSMUST00000198213 73 ntBASIC30.02■■■□□ 2.4
Col23a1Q8K4G2 Gm45364-201ENSMUST00000210883 159 ntBASIC30.02■■■□□ 2.4
Col23a1Q8K4G2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.01■■■□□ 2.39
Col23a1Q8K4G2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
Col23a1Q8K4G2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Col23a1Q8K4G2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Col23a1Q8K4G2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Col23a1Q8K4G2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Col23a1Q8K4G2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col23a1Q8K4G2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Col23a1Q8K4G2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col23a1Q8K4G2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col23a1Q8K4G2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms