Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.28■■□□□ 1
SprnQ8BWU1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SprnQ8BWU1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.28■■□□□ 1
SprnQ8BWU1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.28■■□□□ 1
SprnQ8BWU1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SprnQ8BWU1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.27■■□□□ 1
SprnQ8BWU1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SprnQ8BWU1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SprnQ8BWU1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SprnQ8BWU1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SprnQ8BWU1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SprnQ8BWU1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SprnQ8BWU1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.22■□□□□ 0.99
SprnQ8BWU1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SprnQ8BWU1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SprnQ8BWU1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SprnQ8BWU1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SprnQ8BWU1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SprnQ8BWU1 Gm16148-201ENSMUST00000119653 893 ntBASIC21.21■□□□□ 0.99
SprnQ8BWU1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SprnQ8BWU1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SprnQ8BWU1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SprnQ8BWU1 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.2■□□□□ 0.98
SprnQ8BWU1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SprnQ8BWU1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SprnQ8BWU1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SprnQ8BWU1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SprnQ8BWU1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SprnQ8BWU1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SprnQ8BWU1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SprnQ8BWU1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SprnQ8BWU1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SprnQ8BWU1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SprnQ8BWU1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SprnQ8BWU1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SprnQ8BWU1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SprnQ8BWU1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SprnQ8BWU1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SprnQ8BWU1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SprnQ8BWU1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SprnQ8BWU1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SprnQ8BWU1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SprnQ8BWU1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SprnQ8BWU1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SprnQ8BWU1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SprnQ8BWU1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SprnQ8BWU1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SprnQ8BWU1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.06■□□□□ 0.96
SprnQ8BWU1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.06■□□□□ 0.96
SprnQ8BWU1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SprnQ8BWU1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SprnQ8BWU1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SprnQ8BWU1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SprnQ8BWU1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SprnQ8BWU1 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.02■□□□□ 0.96
SprnQ8BWU1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
SprnQ8BWU1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
SprnQ8BWU1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SprnQ8BWU1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SprnQ8BWU1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SprnQ8BWU1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21■□□□□ 0.95
SprnQ8BWU1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SprnQ8BWU1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms