Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.28■■□□□ 1
SprnQ8BWU1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SprnQ8BWU1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.28■■□□□ 1
SprnQ8BWU1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.28■■□□□ 1
SprnQ8BWU1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SprnQ8BWU1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.27■■□□□ 1
SprnQ8BWU1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SprnQ8BWU1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SprnQ8BWU1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SprnQ8BWU1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SprnQ8BWU1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SprnQ8BWU1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SprnQ8BWU1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SprnQ8BWU1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SprnQ8BWU1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.22■□□□□ 0.99
SprnQ8BWU1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SprnQ8BWU1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SprnQ8BWU1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SprnQ8BWU1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SprnQ8BWU1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SprnQ8BWU1 Gm16148-201ENSMUST00000119653 893 ntBASIC21.21■□□□□ 0.99
SprnQ8BWU1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SprnQ8BWU1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SprnQ8BWU1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SprnQ8BWU1 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.2■□□□□ 0.98
SprnQ8BWU1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SprnQ8BWU1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SprnQ8BWU1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SprnQ8BWU1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SprnQ8BWU1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SprnQ8BWU1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.17■□□□□ 0.98
SprnQ8BWU1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SprnQ8BWU1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SprnQ8BWU1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SprnQ8BWU1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SprnQ8BWU1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SprnQ8BWU1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SprnQ8BWU1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SprnQ8BWU1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SprnQ8BWU1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SprnQ8BWU1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SprnQ8BWU1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SprnQ8BWU1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SprnQ8BWU1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SprnQ8BWU1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SprnQ8BWU1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SprnQ8BWU1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SprnQ8BWU1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SprnQ8BWU1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SprnQ8BWU1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SprnQ8BWU1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SprnQ8BWU1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SprnQ8BWU1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.06■□□□□ 0.96
SprnQ8BWU1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.06■□□□□ 0.96
SprnQ8BWU1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SprnQ8BWU1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SprnQ8BWU1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SprnQ8BWU1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SprnQ8BWU1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SprnQ8BWU1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SprnQ8BWU1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SprnQ8BWU1 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.02■□□□□ 0.96
SprnQ8BWU1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
SprnQ8BWU1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
SprnQ8BWU1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SprnQ8BWU1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SprnQ8BWU1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SprnQ8BWU1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21■□□□□ 0.95
SprnQ8BWU1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SprnQ8BWU1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms