Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Shank2Q80Z38 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Shank2Q80Z38 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Shank2Q80Z38 Particl-201ENSMUST00000205370 1560 ntBASIC32.24■■■□□ 2.75
Shank2Q80Z38 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Shank2Q80Z38 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC32.23■■■□□ 2.75
Shank2Q80Z38 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Shank2Q80Z38 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Shank2Q80Z38 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
Shank2Q80Z38 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Shank2Q80Z38 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Shank2Q80Z38 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC32.19■■■□□ 2.74
Shank2Q80Z38 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC32.19■■■□□ 2.74
Shank2Q80Z38 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Shank2Q80Z38 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Shank2Q80Z38 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Shank2Q80Z38 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Shank2Q80Z38 Scarna2-201ENSMUST00000157560 414 ntBASIC32.16■■■□□ 2.74
Shank2Q80Z38 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Shank2Q80Z38 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
Shank2Q80Z38 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Shank2Q80Z38 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
Shank2Q80Z38 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
Shank2Q80Z38 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Shank2Q80Z38 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Shank2Q80Z38 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Shank2Q80Z38 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Shank2Q80Z38 Gm4799-201ENSMUST00000095396 657 ntBASIC32.14■■■□□ 2.74
Shank2Q80Z38 Gm15039-201ENSMUST00000118914 875 ntBASIC32.13■■■□□ 2.73
Shank2Q80Z38 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Shank2Q80Z38 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Shank2Q80Z38 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC32.11■■■□□ 2.73
Shank2Q80Z38 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC32.11■■■□□ 2.73
Shank2Q80Z38 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Shank2Q80Z38 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Shank2Q80Z38 Gm9806-201ENSMUST00000051080 552 ntBASIC32.11■■■□□ 2.73
Shank2Q80Z38 Gm11687-201ENSMUST00000118911 886 ntBASIC32.1■■■□□ 2.73
Shank2Q80Z38 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC32.1■■■□□ 2.73
Shank2Q80Z38 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Shank2Q80Z38 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
Shank2Q80Z38 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Shank2Q80Z38 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Shank2Q80Z38 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Shank2Q80Z38 Gm6658-202ENSMUST00000209493 1885 ntBASIC32.08■■■□□ 2.73
Shank2Q80Z38 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.06■■■□□ 2.72
Shank2Q80Z38 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Shank2Q80Z38 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC32.04■■■□□ 2.72
Shank2Q80Z38 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.04■■■□□ 2.72
Shank2Q80Z38 Gm30023-201ENSMUST00000197970 889 ntBASIC32.03■■■□□ 2.72
Shank2Q80Z38 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Shank2Q80Z38 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC32.02■■■□□ 2.72
Shank2Q80Z38 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC32■■■□□ 2.71
Shank2Q80Z38 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC32■■■□□ 2.71
Shank2Q80Z38 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC32■■■□□ 2.71
Shank2Q80Z38 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Shank2Q80Z38 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Shank2Q80Z38 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Shank2Q80Z38 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Shank2Q80Z38 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Shank2Q80Z38 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
Shank2Q80Z38 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Shank2Q80Z38 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Shank2Q80Z38 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.95■■■□□ 2.7
Shank2Q80Z38 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Shank2Q80Z38 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31.94■■■□□ 2.7
Shank2Q80Z38 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Shank2Q80Z38 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Shank2Q80Z38 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Shank2Q80Z38 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Shank2Q80Z38 Gm27502-201ENSMUST00000183495 199 ntBASIC31.91■■■□□ 2.7
Shank2Q80Z38 Pkd1-207ENSMUST00000228550 1050 ntBASIC31.91■■■□□ 2.7
Shank2Q80Z38 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Shank2Q80Z38 Gm16437-201ENSMUST00000025669 507 ntBASIC31.89■■■□□ 2.7
Shank2Q80Z38 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Shank2Q80Z38 Gm7332-201ENSMUST00000118351 454 ntBASIC31.88■■■□□ 2.69
Shank2Q80Z38 AC154454.1-201ENSMUST00000225253 216 ntBASIC31.88■■■□□ 2.69
Shank2Q80Z38 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Shank2Q80Z38 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC31.88■■■□□ 2.69
Shank2Q80Z38 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Shank2Q80Z38 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Shank2Q80Z38 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Shank2Q80Z38 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Shank2Q80Z38 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Shank2Q80Z38 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Shank2Q80Z38 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.69
Shank2Q80Z38 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Shank2Q80Z38 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC31.81■■■□□ 2.68
Shank2Q80Z38 Gm22567-201ENSMUST00000175542 342 ntBASIC31.81■■■□□ 2.68
Shank2Q80Z38 Gm45364-201ENSMUST00000210883 159 ntBASIC31.81■■■□□ 2.68
Shank2Q80Z38 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
Shank2Q80Z38 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Shank2Q80Z38 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.77■■■□□ 2.68
Shank2Q80Z38 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Shank2Q80Z38 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Shank2Q80Z38 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Shank2Q80Z38 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Shank2Q80Z38 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Shank2Q80Z38 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Shank2Q80Z38 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31.72■■■□□ 2.67
Shank2Q80Z38 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms