Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Tnrc18Q80WC3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.9■■□□□ 1.58
Tnrc18Q80WC3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Tnrc18Q80WC3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tnrc18Q80WC3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tnrc18Q80WC3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Tnrc18Q80WC3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tnrc18Q80WC3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Tnrc18Q80WC3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.87■■□□□ 1.57
Tnrc18Q80WC3 Gm12366-201ENSMUST00000121722 873 ntBASIC24.87■■□□□ 1.57
Tnrc18Q80WC3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.87■■□□□ 1.57
Tnrc18Q80WC3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.87■■□□□ 1.57
Tnrc18Q80WC3 Gm5786-201ENSMUST00000085368 882 ntBASIC24.87■■□□□ 1.57
Tnrc18Q80WC3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tnrc18Q80WC3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Tnrc18Q80WC3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Tnrc18Q80WC3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Tnrc18Q80WC3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tnrc18Q80WC3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Tnrc18Q80WC3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.85■■□□□ 1.57
Tnrc18Q80WC3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.85■■□□□ 1.57
Tnrc18Q80WC3 Gm4799-201ENSMUST00000095396 657 ntBASIC24.84■■□□□ 1.57
Tnrc18Q80WC3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.83■■□□□ 1.57
Tnrc18Q80WC3 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.83■■□□□ 1.57
Tnrc18Q80WC3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Tnrc18Q80WC3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Tnrc18Q80WC3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Tnrc18Q80WC3 Particl-201ENSMUST00000205370 1560 ntBASIC24.82■■□□□ 1.56
Tnrc18Q80WC3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Tnrc18Q80WC3 Gm15039-201ENSMUST00000118914 875 ntBASIC24.82■■□□□ 1.56
Tnrc18Q80WC3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Tnrc18Q80WC3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Tnrc18Q80WC3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tnrc18Q80WC3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Tnrc18Q80WC3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tnrc18Q80WC3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tnrc18Q80WC3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tnrc18Q80WC3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tnrc18Q80WC3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Tnrc18Q80WC3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Tnrc18Q80WC3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.79■■□□□ 1.56
Tnrc18Q80WC3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Tnrc18Q80WC3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Tnrc18Q80WC3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Tnrc18Q80WC3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.78■■□□□ 1.56
Tnrc18Q80WC3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.77■■□□□ 1.56
Tnrc18Q80WC3 Scarna2-201ENSMUST00000157560 414 ntBASIC24.77■■□□□ 1.56
Tnrc18Q80WC3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnrc18Q80WC3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tnrc18Q80WC3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Tnrc18Q80WC3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
Tnrc18Q80WC3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Tnrc18Q80WC3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Tnrc18Q80WC3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Tnrc18Q80WC3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.73■■□□□ 1.55
Tnrc18Q80WC3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Tnrc18Q80WC3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
Tnrc18Q80WC3 Gm9806-201ENSMUST00000051080 552 ntBASIC24.71■■□□□ 1.55
Tnrc18Q80WC3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Tnrc18Q80WC3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Tnrc18Q80WC3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.69■■□□□ 1.54
Tnrc18Q80WC3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Tnrc18Q80WC3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Tnrc18Q80WC3 Gm5812-201ENSMUST00000061073 957 ntBASIC24.68■■□□□ 1.54
Tnrc18Q80WC3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Tnrc18Q80WC3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Tnrc18Q80WC3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.67■■□□□ 1.54
Tnrc18Q80WC3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Tnrc18Q80WC3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Tnrc18Q80WC3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Tnrc18Q80WC3 Gm11687-201ENSMUST00000118911 886 ntBASIC24.65■■□□□ 1.54
Tnrc18Q80WC3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
Tnrc18Q80WC3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Tnrc18Q80WC3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Tnrc18Q80WC3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.63■■□□□ 1.53
Tnrc18Q80WC3 Gm30023-201ENSMUST00000197970 889 ntBASIC24.63■■□□□ 1.53
Tnrc18Q80WC3 Gm45364-201ENSMUST00000210883 159 ntBASIC24.63■■□□□ 1.53
Tnrc18Q80WC3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Tnrc18Q80WC3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Tnrc18Q80WC3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Tnrc18Q80WC3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Tnrc18Q80WC3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.62■■□□□ 1.53
Tnrc18Q80WC3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Tnrc18Q80WC3 Gm16437-201ENSMUST00000025669 507 ntBASIC24.61■■□□□ 1.53
Tnrc18Q80WC3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Tnrc18Q80WC3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Tnrc18Q80WC3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Tnrc18Q80WC3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Tnrc18Q80WC3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Tnrc18Q80WC3 Gm22567-201ENSMUST00000175542 342 ntBASIC24.59■■□□□ 1.53
Tnrc18Q80WC3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Tnrc18Q80WC3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnrc18Q80WC3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnrc18Q80WC3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnrc18Q80WC3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnrc18Q80WC3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Tnrc18Q80WC3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Tnrc18Q80WC3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.57■■□□□ 1.52
Tnrc18Q80WC3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Tnrc18Q80WC3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms