Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Prpf38bQ80SY5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Prpf38bQ80SY5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.86■■□□□ 1.57
Prpf38bQ80SY5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
Prpf38bQ80SY5 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.86■■□□□ 1.57
Prpf38bQ80SY5 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Prpf38bQ80SY5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Prpf38bQ80SY5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Prpf38bQ80SY5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Prpf38bQ80SY5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Prpf38bQ80SY5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Prpf38bQ80SY5 Gm6311-201ENSMUST00000073790 878 ntBASIC24.84■■□□□ 1.57
Prpf38bQ80SY5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Prpf38bQ80SY5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
Prpf38bQ80SY5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Prpf38bQ80SY5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Prpf38bQ80SY5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Prpf38bQ80SY5 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.81■■□□□ 1.56
Prpf38bQ80SY5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Prpf38bQ80SY5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.8■■□□□ 1.56
Prpf38bQ80SY5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Prpf38bQ80SY5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Prpf38bQ80SY5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Prpf38bQ80SY5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Prpf38bQ80SY5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.78■■□□□ 1.56
Prpf38bQ80SY5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Prpf38bQ80SY5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Prpf38bQ80SY5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Prpf38bQ80SY5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Prpf38bQ80SY5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Prpf38bQ80SY5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.76■■□□□ 1.55
Prpf38bQ80SY5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.76■■□□□ 1.55
Prpf38bQ80SY5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.76■■□□□ 1.55
Prpf38bQ80SY5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Prpf38bQ80SY5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.75■■□□□ 1.55
Prpf38bQ80SY5 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.74■■□□□ 1.55
Prpf38bQ80SY5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Prpf38bQ80SY5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Prpf38bQ80SY5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Prpf38bQ80SY5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.73■■□□□ 1.55
Prpf38bQ80SY5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Prpf38bQ80SY5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Prpf38bQ80SY5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Prpf38bQ80SY5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Prpf38bQ80SY5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Prpf38bQ80SY5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Prpf38bQ80SY5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Prpf38bQ80SY5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Prpf38bQ80SY5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Prpf38bQ80SY5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Prpf38bQ80SY5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.69■■□□□ 1.54
Prpf38bQ80SY5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.68■■□□□ 1.54
Prpf38bQ80SY5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prpf38bQ80SY5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Prpf38bQ80SY5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Prpf38bQ80SY5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Prpf38bQ80SY5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Prpf38bQ80SY5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
Prpf38bQ80SY5 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.65■■□□□ 1.54
Prpf38bQ80SY5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Prpf38bQ80SY5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Prpf38bQ80SY5 Amer2-203ENSMUST00000225247 2662 ntBASIC24.64■■□□□ 1.53
Prpf38bQ80SY5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Prpf38bQ80SY5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.62■■□□□ 1.53
Prpf38bQ80SY5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Prpf38bQ80SY5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Prpf38bQ80SY5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Prpf38bQ80SY5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Prpf38bQ80SY5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Prpf38bQ80SY5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.61■■□□□ 1.53
Prpf38bQ80SY5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Prpf38bQ80SY5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Prpf38bQ80SY5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Prpf38bQ80SY5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Prpf38bQ80SY5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Prpf38bQ80SY5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Prpf38bQ80SY5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Prpf38bQ80SY5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Prpf38bQ80SY5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Prpf38bQ80SY5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Prpf38bQ80SY5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Prpf38bQ80SY5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Prpf38bQ80SY5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.57■■□□□ 1.52
Prpf38bQ80SY5 Gm12366-201ENSMUST00000121722 873 ntBASIC24.57■■□□□ 1.52
Prpf38bQ80SY5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.57■■□□□ 1.52
Prpf38bQ80SY5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Prpf38bQ80SY5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.57■■□□□ 1.52
Prpf38bQ80SY5 Gm5786-201ENSMUST00000085368 882 ntBASIC24.57■■□□□ 1.52
Prpf38bQ80SY5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Prpf38bQ80SY5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Prpf38bQ80SY5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Prpf38bQ80SY5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Prpf38bQ80SY5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Prpf38bQ80SY5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Prpf38bQ80SY5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.56■■□□□ 1.52
Prpf38bQ80SY5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.56■■□□□ 1.52
Prpf38bQ80SY5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.56■■□□□ 1.52
Prpf38bQ80SY5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Prpf38bQ80SY5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Prpf38bQ80SY5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms