Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.77■■□□□ 1.08
Foxd3Q61060 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Foxd3Q61060 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.76■■□□□ 1.07
Foxd3Q61060 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxd3Q61060 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxd3Q61060 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxd3Q61060 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.74■■□□□ 1.07
Foxd3Q61060 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Foxd3Q61060 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.73■■□□□ 1.07
Foxd3Q61060 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Foxd3Q61060 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxd3Q61060 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Foxd3Q61060 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxd3Q61060 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Foxd3Q61060 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Foxd3Q61060 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.69■■□□□ 1.06
Foxd3Q61060 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxd3Q61060 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.69■■□□□ 1.06
Foxd3Q61060 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Foxd3Q61060 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.68■■□□□ 1.06
Foxd3Q61060 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxd3Q61060 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.68■■□□□ 1.06
Foxd3Q61060 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Foxd3Q61060 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxd3Q61060 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.66■■□□□ 1.06
Foxd3Q61060 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Foxd3Q61060 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.65■■□□□ 1.06
Foxd3Q61060 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxd3Q61060 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Foxd3Q61060 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxd3Q61060 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxd3Q61060 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Foxd3Q61060 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxd3Q61060 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxd3Q61060 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Foxd3Q61060 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxd3Q61060 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Foxd3Q61060 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxd3Q61060 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Foxd3Q61060 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Foxd3Q61060 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Foxd3Q61060 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxd3Q61060 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxd3Q61060 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Foxd3Q61060 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.58■■□□□ 1.05
Foxd3Q61060 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Foxd3Q61060 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.57■■□□□ 1.04
Foxd3Q61060 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.57■■□□□ 1.04
Foxd3Q61060 Gm24970-201ENSMUST00000175582 82 ntBASIC21.56■■□□□ 1.04
Foxd3Q61060 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.56■■□□□ 1.04
Foxd3Q61060 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.56■■□□□ 1.04
Foxd3Q61060 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Foxd3Q61060 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Foxd3Q61060 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Foxd3Q61060 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.55■■□□□ 1.04
Foxd3Q61060 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Foxd3Q61060 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Foxd3Q61060 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Foxd3Q61060 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Foxd3Q61060 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Foxd3Q61060 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Foxd3Q61060 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Foxd3Q61060 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Foxd3Q61060 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Foxd3Q61060 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Foxd3Q61060 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Foxd3Q61060 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Foxd3Q61060 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Foxd3Q61060 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
Foxd3Q61060 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Foxd3Q61060 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.52■■□□□ 1.03
Foxd3Q61060 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Foxd3Q61060 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Foxd3Q61060 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
Foxd3Q61060 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.5■■□□□ 1.03
Foxd3Q61060 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Foxd3Q61060 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Foxd3Q61060 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Foxd3Q61060 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Foxd3Q61060 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Foxd3Q61060 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Foxd3Q61060 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.49■■□□□ 1.03
Foxd3Q61060 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Foxd3Q61060 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Foxd3Q61060 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Foxd3Q61060 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Foxd3Q61060 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Foxd3Q61060 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Foxd3Q61060 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Foxd3Q61060 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Foxd3Q61060 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Foxd3Q61060 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Foxd3Q61060 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Foxd3Q61060 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.45■■□□□ 1.02
Foxd3Q61060 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.45■■□□□ 1.02
Foxd3Q61060 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.45■■□□□ 1.02
Foxd3Q61060 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxd3Q61060 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxd3Q61060 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Foxd3Q61060 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms