Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarb1Q61009 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scarb1Q61009 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scarb1Q61009 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scarb1Q61009 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scarb1Q61009 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Scarb1Q61009 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scarb1Q61009 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scarb1Q61009 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Scarb1Q61009 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scarb1Q61009 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Scarb1Q61009 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.91■□□□□ 0.78
Scarb1Q61009 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scarb1Q61009 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scarb1Q61009 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.91■□□□□ 0.78
Scarb1Q61009 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scarb1Q61009 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scarb1Q61009 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scarb1Q61009 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Scarb1Q61009 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scarb1Q61009 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scarb1Q61009 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scarb1Q61009 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scarb1Q61009 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scarb1Q61009 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scarb1Q61009 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scarb1Q61009 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scarb1Q61009 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scarb1Q61009 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scarb1Q61009 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scarb1Q61009 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scarb1Q61009 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scarb1Q61009 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.87■□□□□ 0.77
Scarb1Q61009 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scarb1Q61009 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scarb1Q61009 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scarb1Q61009 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scarb1Q61009 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.85■□□□□ 0.77
Scarb1Q61009 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Scarb1Q61009 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scarb1Q61009 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scarb1Q61009 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scarb1Q61009 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Scarb1Q61009 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scarb1Q61009 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scarb1Q61009 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scarb1Q61009 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scarb1Q61009 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.83■□□□□ 0.77
Scarb1Q61009 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scarb1Q61009 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scarb1Q61009 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.83■□□□□ 0.77
Scarb1Q61009 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scarb1Q61009 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Scarb1Q61009 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scarb1Q61009 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scarb1Q61009 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scarb1Q61009 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scarb1Q61009 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Scarb1Q61009 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scarb1Q61009 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scarb1Q61009 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scarb1Q61009 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scarb1Q61009 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scarb1Q61009 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.8■□□□□ 0.76
Scarb1Q61009 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scarb1Q61009 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scarb1Q61009 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scarb1Q61009 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Scarb1Q61009 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scarb1Q61009 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Scarb1Q61009 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Scarb1Q61009 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.79■□□□□ 0.76
Scarb1Q61009 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scarb1Q61009 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Scarb1Q61009 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scarb1Q61009 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scarb1Q61009 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scarb1Q61009 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scarb1Q61009 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scarb1Q61009 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scarb1Q61009 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scarb1Q61009 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scarb1Q61009 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scarb1Q61009 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scarb1Q61009 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scarb1Q61009 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scarb1Q61009 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scarb1Q61009 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scarb1Q61009 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.75■□□□□ 0.75
Scarb1Q61009 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.75■□□□□ 0.75
Scarb1Q61009 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.74■□□□□ 0.75
Scarb1Q61009 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Scarb1Q61009 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scarb1Q61009 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scarb1Q61009 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scarb1Q61009 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Scarb1Q61009 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.73■□□□□ 0.75
Scarb1Q61009 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Scarb1Q61009 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scarb1Q61009 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms