Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.56■■□□□ 1.68
Shroom1Q5SX79 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom1Q5SX79 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Shroom1Q5SX79 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Shroom1Q5SX79 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Shroom1Q5SX79 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Shroom1Q5SX79 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Shroom1Q5SX79 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Shroom1Q5SX79 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.5■■□□□ 1.67
Shroom1Q5SX79 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Shroom1Q5SX79 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Shroom1Q5SX79 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.49■■□□□ 1.67
Shroom1Q5SX79 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.49■■□□□ 1.67
Shroom1Q5SX79 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Shroom1Q5SX79 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shroom1Q5SX79 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shroom1Q5SX79 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shroom1Q5SX79 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shroom1Q5SX79 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.47■■□□□ 1.67
Shroom1Q5SX79 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
Shroom1Q5SX79 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom1Q5SX79 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom1Q5SX79 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.45■■□□□ 1.66
Shroom1Q5SX79 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom1Q5SX79 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Shroom1Q5SX79 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Shroom1Q5SX79 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Shroom1Q5SX79 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.41■■□□□ 1.66
Shroom1Q5SX79 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Shroom1Q5SX79 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom1Q5SX79 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom1Q5SX79 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom1Q5SX79 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom1Q5SX79 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Shroom1Q5SX79 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom1Q5SX79 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.36■■□□□ 1.65
Shroom1Q5SX79 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom1Q5SX79 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom1Q5SX79 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom1Q5SX79 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Gm30023-201ENSMUST00000197970 889 ntBASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shroom1Q5SX79 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.32■■□□□ 1.64
Shroom1Q5SX79 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shroom1Q5SX79 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.31■■□□□ 1.64
Shroom1Q5SX79 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Shroom1Q5SX79 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.3■■□□□ 1.64
Shroom1Q5SX79 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Shroom1Q5SX79 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom1Q5SX79 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.29■■□□□ 1.64
Shroom1Q5SX79 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom1Q5SX79 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.28■■□□□ 1.64
Shroom1Q5SX79 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Shroom1Q5SX79 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.27■■□□□ 1.64
Shroom1Q5SX79 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Shroom1Q5SX79 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Shroom1Q5SX79 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom1Q5SX79 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom1Q5SX79 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom1Q5SX79 Particl-201ENSMUST00000205370 1560 ntBASIC25.24■■□□□ 1.63
Shroom1Q5SX79 Mir6538-201ENSMUST00000183713 110 ntBASIC25.24■■□□□ 1.63
Shroom1Q5SX79 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom1Q5SX79 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
Shroom1Q5SX79 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom1Q5SX79 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom1Q5SX79 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.22■■□□□ 1.63
Shroom1Q5SX79 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.22■■□□□ 1.63
Shroom1Q5SX79 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom1Q5SX79 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom1Q5SX79 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Shroom1Q5SX79 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom1Q5SX79 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom1Q5SX79 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms