Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.56■■□□□ 1.68
Shroom1Q5SX79 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Shroom1Q5SX79 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Shroom1Q5SX79 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Shroom1Q5SX79 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Shroom1Q5SX79 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Shroom1Q5SX79 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Shroom1Q5SX79 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Shroom1Q5SX79 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Shroom1Q5SX79 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.5■■□□□ 1.67
Shroom1Q5SX79 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Shroom1Q5SX79 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Shroom1Q5SX79 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.49■■□□□ 1.67
Shroom1Q5SX79 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.49■■□□□ 1.67
Shroom1Q5SX79 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Shroom1Q5SX79 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shroom1Q5SX79 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shroom1Q5SX79 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shroom1Q5SX79 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Shroom1Q5SX79 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.47■■□□□ 1.67
Shroom1Q5SX79 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
Shroom1Q5SX79 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.46■■□□□ 1.67
Shroom1Q5SX79 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom1Q5SX79 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom1Q5SX79 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.45■■□□□ 1.66
Shroom1Q5SX79 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Shroom1Q5SX79 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Shroom1Q5SX79 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Shroom1Q5SX79 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Shroom1Q5SX79 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Shroom1Q5SX79 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.41■■□□□ 1.66
Shroom1Q5SX79 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Shroom1Q5SX79 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom1Q5SX79 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom1Q5SX79 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom1Q5SX79 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom1Q5SX79 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Shroom1Q5SX79 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom1Q5SX79 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.36■■□□□ 1.65
Shroom1Q5SX79 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom1Q5SX79 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom1Q5SX79 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom1Q5SX79 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom1Q5SX79 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Gm30023-201ENSMUST00000197970 889 ntBASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.33■■□□□ 1.65
Shroom1Q5SX79 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shroom1Q5SX79 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.32■■□□□ 1.64
Shroom1Q5SX79 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shroom1Q5SX79 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.31■■□□□ 1.64
Shroom1Q5SX79 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Shroom1Q5SX79 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.3■■□□□ 1.64
Shroom1Q5SX79 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Shroom1Q5SX79 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom1Q5SX79 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.29■■□□□ 1.64
Shroom1Q5SX79 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Shroom1Q5SX79 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.28■■□□□ 1.64
Shroom1Q5SX79 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Shroom1Q5SX79 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.27■■□□□ 1.64
Shroom1Q5SX79 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Shroom1Q5SX79 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Shroom1Q5SX79 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom1Q5SX79 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Shroom1Q5SX79 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom1Q5SX79 Particl-201ENSMUST00000205370 1560 ntBASIC25.24■■□□□ 1.63
Shroom1Q5SX79 Mir6538-201ENSMUST00000183713 110 ntBASIC25.24■■□□□ 1.63
Shroom1Q5SX79 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Shroom1Q5SX79 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
Shroom1Q5SX79 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom1Q5SX79 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Shroom1Q5SX79 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.22■■□□□ 1.63
Shroom1Q5SX79 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.22■■□□□ 1.63
Shroom1Q5SX79 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Shroom1Q5SX79 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Shroom1Q5SX79 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Shroom1Q5SX79 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom1Q5SX79 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Shroom1Q5SX79 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms