Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nell1Q2VWQ2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Nell1Q2VWQ2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Nell1Q2VWQ2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nell1Q2VWQ2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nell1Q2VWQ2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Nell1Q2VWQ2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.39■■□□□ 1.33
Nell1Q2VWQ2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.39■■□□□ 1.33
Nell1Q2VWQ2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Nell1Q2VWQ2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.38■■□□□ 1.33
Nell1Q2VWQ2 Gm6311-201ENSMUST00000073790 878 ntBASIC23.38■■□□□ 1.33
Nell1Q2VWQ2 Zxda-201ENSMUST00000117281 2621 ntBASIC23.37■■□□□ 1.33
Nell1Q2VWQ2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Nell1Q2VWQ2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nell1Q2VWQ2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.36■■□□□ 1.33
Nell1Q2VWQ2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Nell1Q2VWQ2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nell1Q2VWQ2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.34■■□□□ 1.33
Nell1Q2VWQ2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Nell1Q2VWQ2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nell1Q2VWQ2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Nell1Q2VWQ2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
Nell1Q2VWQ2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Nell1Q2VWQ2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Nell1Q2VWQ2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Nell1Q2VWQ2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Nell1Q2VWQ2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Nell1Q2VWQ2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.3■■□□□ 1.32
Nell1Q2VWQ2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Nell1Q2VWQ2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Nell1Q2VWQ2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Nell1Q2VWQ2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.29■■□□□ 1.32
Nell1Q2VWQ2 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.28■■□□□ 1.32
Nell1Q2VWQ2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Nell1Q2VWQ2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Nell1Q2VWQ2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Nell1Q2VWQ2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nell1Q2VWQ2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nell1Q2VWQ2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.26■■□□□ 1.31
Nell1Q2VWQ2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nell1Q2VWQ2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Nell1Q2VWQ2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Nell1Q2VWQ2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nell1Q2VWQ2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.24■■□□□ 1.31
Nell1Q2VWQ2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.23■■□□□ 1.31
Nell1Q2VWQ2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Nell1Q2VWQ2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nell1Q2VWQ2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nell1Q2VWQ2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Nell1Q2VWQ2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nell1Q2VWQ2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nell1Q2VWQ2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nell1Q2VWQ2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Nell1Q2VWQ2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nell1Q2VWQ2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Nell1Q2VWQ2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Nell1Q2VWQ2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nell1Q2VWQ2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nell1Q2VWQ2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nell1Q2VWQ2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.2■■□□□ 1.3
Nell1Q2VWQ2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Nell1Q2VWQ2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Nell1Q2VWQ2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.2■■□□□ 1.3
Nell1Q2VWQ2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Nell1Q2VWQ2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nell1Q2VWQ2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Nell1Q2VWQ2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Nell1Q2VWQ2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Nell1Q2VWQ2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Nell1Q2VWQ2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nell1Q2VWQ2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nell1Q2VWQ2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Nell1Q2VWQ2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Nell1Q2VWQ2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Nell1Q2VWQ2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Nell1Q2VWQ2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Nell1Q2VWQ2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.14■■□□□ 1.29
Nell1Q2VWQ2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Nell1Q2VWQ2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Nell1Q2VWQ2 Particl-201ENSMUST00000205370 1560 ntBASIC23.13■■□□□ 1.29
Nell1Q2VWQ2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Nell1Q2VWQ2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Nell1Q2VWQ2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Nell1Q2VWQ2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nell1Q2VWQ2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Nell1Q2VWQ2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nell1Q2VWQ2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nell1Q2VWQ2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nell1Q2VWQ2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Nell1Q2VWQ2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nell1Q2VWQ2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Nell1Q2VWQ2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nell1Q2VWQ2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Nell1Q2VWQ2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
Nell1Q2VWQ2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.1■■□□□ 1.29
Nell1Q2VWQ2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Nell1Q2VWQ2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Nell1Q2VWQ2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nell1Q2VWQ2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nell1Q2VWQ2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms