Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sec61a1P61620 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sec61a1P61620 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.75■□□□□ 0.91
Sec61a1P61620 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sec61a1P61620 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Sec61a1P61620 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.73■□□□□ 0.91
Sec61a1P61620 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a1P61620 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Sec61a1P61620 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a1P61620 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Sec61a1P61620 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a1P61620 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Sec61a1P61620 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sec61a1P61620 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sec61a1P61620 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Sec61a1P61620 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sec61a1P61620 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.7■□□□□ 0.9
Sec61a1P61620 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Sec61a1P61620 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.7■□□□□ 0.9
Sec61a1P61620 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sec61a1P61620 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sec61a1P61620 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a1P61620 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a1P61620 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a1P61620 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sec61a1P61620 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sec61a1P61620 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sec61a1P61620 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sec61a1P61620 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sec61a1P61620 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sec61a1P61620 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sec61a1P61620 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sec61a1P61620 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Sec61a1P61620 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sec61a1P61620 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec61a1P61620 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sec61a1P61620 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.64■□□□□ 0.89
Sec61a1P61620 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Sec61a1P61620 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sec61a1P61620 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sec61a1P61620 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sec61a1P61620 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sec61a1P61620 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a1P61620 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a1P61620 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sec61a1P61620 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sec61a1P61620 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sec61a1P61620 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.6■□□□□ 0.89
Sec61a1P61620 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.6■□□□□ 0.89
Sec61a1P61620 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a1P61620 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a1P61620 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.59■□□□□ 0.89
Sec61a1P61620 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sec61a1P61620 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sec61a1P61620 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.57■□□□□ 0.88
Sec61a1P61620 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.57■□□□□ 0.88
Sec61a1P61620 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.56■□□□□ 0.88
Sec61a1P61620 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sec61a1P61620 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sec61a1P61620 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sec61a1P61620 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.55■□□□□ 0.88
Sec61a1P61620 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sec61a1P61620 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sec61a1P61620 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sec61a1P61620 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sec61a1P61620 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sec61a1P61620 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sec61a1P61620 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Sec61a1P61620 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sec61a1P61620 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sec61a1P61620 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Sec61a1P61620 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sec61a1P61620 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.51■□□□□ 0.87
Sec61a1P61620 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sec61a1P61620 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sec61a1P61620 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sec61a1P61620 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sec61a1P61620 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.49■□□□□ 0.87
Sec61a1P61620 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sec61a1P61620 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sec61a1P61620 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sec61a1P61620 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sec61a1P61620 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sec61a1P61620 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.47■□□□□ 0.87
Sec61a1P61620 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a1P61620 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a1P61620 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Sec61a1P61620 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 155.4 ms