Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hist1h1aP43275 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hist1h1aP43275 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Hist1h1aP43275 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hist1h1aP43275 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h1aP43275 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h1aP43275 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Hist1h1aP43275 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h1aP43275 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Hist1h1aP43275 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hist1h1aP43275 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.49■□□□□ 0.71
Hist1h1aP43275 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.49■□□□□ 0.71
Hist1h1aP43275 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h1aP43275 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h1aP43275 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h1aP43275 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h1aP43275 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h1aP43275 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1aP43275 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1aP43275 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Hist1h1aP43275 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h1aP43275 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h1aP43275 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h1aP43275 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Hist1h1aP43275 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.45■□□□□ 0.7
Hist1h1aP43275 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h1aP43275 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h1aP43275 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1aP43275 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hist1h1aP43275 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Hist1h1aP43275 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1aP43275 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1aP43275 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1aP43275 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1aP43275 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1aP43275 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1aP43275 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.43■□□□□ 0.7
Hist1h1aP43275 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h1aP43275 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h1aP43275 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h1aP43275 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.43■□□□□ 0.7
Hist1h1aP43275 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h1aP43275 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h1aP43275 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h1aP43275 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h1aP43275 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Hist1h1aP43275 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hist1h1aP43275 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.4■□□□□ 0.7
Hist1h1aP43275 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hist1h1aP43275 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.39■□□□□ 0.7
Hist1h1aP43275 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hist1h1aP43275 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Hist1h1aP43275 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Hist1h1aP43275 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Hist1h1aP43275 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Hist1h1aP43275 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist1h1aP43275 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Hist1h1aP43275 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hist1h1aP43275 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hist1h1aP43275 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h1aP43275 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h1aP43275 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h1aP43275 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hist1h1aP43275 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h1aP43275 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.34■□□□□ 0.69
Hist1h1aP43275 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist1h1aP43275 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hist1h1aP43275 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Hist1h1aP43275 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Hist1h1aP43275 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h1aP43275 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h1aP43275 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h1aP43275 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h1aP43275 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h1aP43275 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h1aP43275 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h1aP43275 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h1aP43275 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.3■□□□□ 0.68
Hist1h1aP43275 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hist1h1aP43275 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h1aP43275 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h1aP43275 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h1aP43275 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h1aP43275 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h1aP43275 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h1aP43275 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h1aP43275 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h1aP43275 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Hist1h1aP43275 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h1aP43275 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h1aP43275 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h1aP43275 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1aP43275 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1aP43275 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h1aP43275 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.26■□□□□ 0.67
Hist1h1aP43275 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h1aP43275 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h1aP43275 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h1aP43275 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h1aP43275 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms