Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PdgfbP31240 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
PdgfbP31240 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.81■■□□□ 1.56
PdgfbP31240 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PdgfbP31240 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PdgfbP31240 Particl-201ENSMUST00000205370 1560 ntBASIC24.8■■□□□ 1.56
PdgfbP31240 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PdgfbP31240 Scarna2-201ENSMUST00000157560 414 ntBASIC24.79■■□□□ 1.56
PdgfbP31240 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PdgfbP31240 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
PdgfbP31240 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.78■■□□□ 1.56
PdgfbP31240 Gm12366-201ENSMUST00000121722 873 ntBASIC24.78■■□□□ 1.56
PdgfbP31240 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.78■■□□□ 1.56
PdgfbP31240 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PdgfbP31240 Gm30023-201ENSMUST00000197970 889 ntBASIC24.78■■□□□ 1.56
PdgfbP31240 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PdgfbP31240 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
PdgfbP31240 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.78■■□□□ 1.56
PdgfbP31240 Gm5786-201ENSMUST00000085368 882 ntBASIC24.78■■□□□ 1.56
PdgfbP31240 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PdgfbP31240 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PdgfbP31240 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PdgfbP31240 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PdgfbP31240 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PdgfbP31240 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PdgfbP31240 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.74■■□□□ 1.55
PdgfbP31240 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PdgfbP31240 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PdgfbP31240 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.72■■□□□ 1.55
PdgfbP31240 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PdgfbP31240 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PdgfbP31240 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PdgfbP31240 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PdgfbP31240 Gm4799-201ENSMUST00000095396 657 ntBASIC24.71■■□□□ 1.55
PdgfbP31240 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PdgfbP31240 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PdgfbP31240 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PdgfbP31240 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.7■■□□□ 1.54
PdgfbP31240 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.7■■□□□ 1.54
PdgfbP31240 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PdgfbP31240 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PdgfbP31240 Gm11687-201ENSMUST00000118911 886 ntBASIC24.69■■□□□ 1.54
PdgfbP31240 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PdgfbP31240 Gm9806-201ENSMUST00000051080 552 ntBASIC24.69■■□□□ 1.54
PdgfbP31240 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PdgfbP31240 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
PdgfbP31240 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PdgfbP31240 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PdgfbP31240 Gm16437-201ENSMUST00000025669 507 ntBASIC24.66■■□□□ 1.54
PdgfbP31240 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.66■■□□□ 1.54
PdgfbP31240 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PdgfbP31240 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.65■■□□□ 1.54
PdgfbP31240 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PdgfbP31240 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PdgfbP31240 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PdgfbP31240 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PdgfbP31240 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PdgfbP31240 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PdgfbP31240 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PdgfbP31240 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.58■■□□□ 1.53
PdgfbP31240 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PdgfbP31240 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PdgfbP31240 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
PdgfbP31240 Gm27502-201ENSMUST00000183495 199 ntBASIC24.56■■□□□ 1.52
PdgfbP31240 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
PdgfbP31240 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.55■■□□□ 1.52
PdgfbP31240 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.54■■□□□ 1.52
PdgfbP31240 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PdgfbP31240 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.54■■□□□ 1.52
PdgfbP31240 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.54■■□□□ 1.52
PdgfbP31240 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.53■■□□□ 1.52
PdgfbP31240 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PdgfbP31240 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PdgfbP31240 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PdgfbP31240 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PdgfbP31240 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PdgfbP31240 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PdgfbP31240 Gm7332-201ENSMUST00000118351 454 ntBASIC24.51■■□□□ 1.51
PdgfbP31240 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.51■■□□□ 1.51
PdgfbP31240 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PdgfbP31240 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PdgfbP31240 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PdgfbP31240 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PdgfbP31240 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.5■■□□□ 1.51
PdgfbP31240 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
PdgfbP31240 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PdgfbP31240 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PdgfbP31240 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PdgfbP31240 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PdgfbP31240 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PdgfbP31240 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PdgfbP31240 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PdgfbP31240 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PdgfbP31240 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PdgfbP31240 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PdgfbP31240 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PdgfbP31240 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
PdgfbP31240 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
PdgfbP31240 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PdgfbP31240 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms