Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Herc1E9PZP8 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.41□□□□□ -0.1
Herc1E9PZP8 Rps24-207ENSMUST00000224568 714 ntBASIC14.41□□□□□ -0.1
Herc1E9PZP8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Herc1E9PZP8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Herc1E9PZP8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Herc1E9PZP8 Gm45102-201ENSMUST00000207427 857 ntBASIC14.4□□□□□ -0.1
Herc1E9PZP8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Herc1E9PZP8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Herc1E9PZP8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Herc1E9PZP8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Herc1E9PZP8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herc1E9PZP8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herc1E9PZP8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Herc1E9PZP8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Herc1E9PZP8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Herc1E9PZP8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC14.36□□□□□ -0.11
Herc1E9PZP8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Herc1E9PZP8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.36□□□□□ -0.11
Herc1E9PZP8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.36□□□□□ -0.11
Herc1E9PZP8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.35□□□□□ -0.11
Herc1E9PZP8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Herc1E9PZP8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.34□□□□□ -0.11
Herc1E9PZP8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Herc1E9PZP8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Herc1E9PZP8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.33□□□□□ -0.11
Herc1E9PZP8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Herc1E9PZP8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Herc1E9PZP8 Gm14117-201ENSMUST00000122417 843 ntBASIC14.33□□□□□ -0.12
Herc1E9PZP8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herc1E9PZP8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Herc1E9PZP8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herc1E9PZP8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Herc1E9PZP8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Herc1E9PZP8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Herc1E9PZP8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Herc1E9PZP8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Herc1E9PZP8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Herc1E9PZP8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Herc1E9PZP8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.3□□□□□ -0.12
Herc1E9PZP8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Herc1E9PZP8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.3□□□□□ -0.12
Herc1E9PZP8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Herc1E9PZP8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Herc1E9PZP8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC14.29□□□□□ -0.12
Herc1E9PZP8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Herc1E9PZP8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Herc1E9PZP8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Herc1E9PZP8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.28□□□□□ -0.12
Herc1E9PZP8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Herc1E9PZP8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Herc1E9PZP8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.27□□□□□ -0.12
Herc1E9PZP8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Herc1E9PZP8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Herc1E9PZP8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Herc1E9PZP8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Herc1E9PZP8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Herc1E9PZP8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.27□□□□□ -0.12
Herc1E9PZP8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Herc1E9PZP8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC14.27□□□□□ -0.13
Herc1E9PZP8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herc1E9PZP8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Herc1E9PZP8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Herc1E9PZP8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Herc1E9PZP8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.25□□□□□ -0.13
Herc1E9PZP8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Herc1E9PZP8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Herc1E9PZP8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.23□□□□□ -0.13
Herc1E9PZP8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Herc1E9PZP8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Herc1E9PZP8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.23□□□□□ -0.13
Herc1E9PZP8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Herc1E9PZP8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Herc1E9PZP8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Herc1E9PZP8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Herc1E9PZP8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.22□□□□□ -0.13
Herc1E9PZP8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.22□□□□□ -0.13
Herc1E9PZP8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Herc1E9PZP8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.22□□□□□ -0.13
Herc1E9PZP8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Herc1E9PZP8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Herc1E9PZP8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Herc1E9PZP8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Herc1E9PZP8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Herc1E9PZP8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Herc1E9PZP8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Herc1E9PZP8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Herc1E9PZP8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Herc1E9PZP8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Herc1E9PZP8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Herc1E9PZP8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Herc1E9PZP8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Herc1E9PZP8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Herc1E9PZP8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Herc1E9PZP8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Herc1E9PZP8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Herc1E9PZP8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Herc1E9PZP8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.16□□□□□ -0.14
Herc1E9PZP8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Herc1E9PZP8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms