Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Scarna2-201ENSMUST00000157560 414 ntBASIC27.38■■□□□ 1.97
Krt28A6BLY7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Krt28A6BLY7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Krt28A6BLY7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Krt28A6BLY7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Krt28A6BLY7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Gm11687-201ENSMUST00000118911 886 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Gm12366-201ENSMUST00000121722 873 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.35■■□□□ 1.97
Krt28A6BLY7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Gm5786-201ENSMUST00000085368 882 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Krt28A6BLY7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.34■■□□□ 1.97
Krt28A6BLY7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Krt28A6BLY7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Krt28A6BLY7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.32■■□□□ 1.96
Krt28A6BLY7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Krt28A6BLY7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Krt28A6BLY7 Gm9806-201ENSMUST00000051080 552 ntBASIC27.3■■□□□ 1.96
Krt28A6BLY7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Krt28A6BLY7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Krt28A6BLY7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Krt28A6BLY7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.28■■□□□ 1.96
Krt28A6BLY7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Krt28A6BLY7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Krt28A6BLY7 Gm30023-201ENSMUST00000197970 889 ntBASIC27.27■■□□□ 1.96
Krt28A6BLY7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Krt28A6BLY7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Krt28A6BLY7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Krt28A6BLY7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Krt28A6BLY7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Krt28A6BLY7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Krt28A6BLY7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
Krt28A6BLY7 Gm16437-201ENSMUST00000025669 507 ntBASIC27.24■■□□□ 1.95
Krt28A6BLY7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Krt28A6BLY7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Krt28A6BLY7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.23■■□□□ 1.95
Krt28A6BLY7 Gm4799-201ENSMUST00000095396 657 ntBASIC27.23■■□□□ 1.95
Krt28A6BLY7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.22■■□□□ 1.95
Krt28A6BLY7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.22■■□□□ 1.95
Krt28A6BLY7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Krt28A6BLY7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Krt28A6BLY7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Krt28A6BLY7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Krt28A6BLY7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Krt28A6BLY7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Krt28A6BLY7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Krt28A6BLY7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Krt28A6BLY7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.16■■□□□ 1.94
Krt28A6BLY7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Krt28A6BLY7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Krt28A6BLY7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Krt28A6BLY7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Krt28A6BLY7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Krt28A6BLY7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
Krt28A6BLY7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.13■■□□□ 1.93
Krt28A6BLY7 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.13■■□□□ 1.93
Krt28A6BLY7 Gm7332-201ENSMUST00000118351 454 ntBASIC27.12■■□□□ 1.93
Krt28A6BLY7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.11■■□□□ 1.93
Krt28A6BLY7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.11■■□□□ 1.93
Krt28A6BLY7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Krt28A6BLY7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Krt28A6BLY7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Krt28A6BLY7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Krt28A6BLY7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Krt28A6BLY7 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.07■■□□□ 1.92
Krt28A6BLY7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Krt28A6BLY7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Krt28A6BLY7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Krt28A6BLY7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.06■■□□□ 1.92
Krt28A6BLY7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Krt28A6BLY7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Krt28A6BLY7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.05■■□□□ 1.92
Krt28A6BLY7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.05■■□□□ 1.92
Krt28A6BLY7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Krt28A6BLY7 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.04■■□□□ 1.92
Krt28A6BLY7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Krt28A6BLY7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Krt28A6BLY7 Gm15039-201ENSMUST00000118914 875 ntBASIC27.03■■□□□ 1.92
Krt28A6BLY7 Mir3960-201ENSMUST00000198213 73 ntBASIC27.02■■□□□ 1.92
Krt28A6BLY7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Krt28A6BLY7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Krt28A6BLY7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
Krt28A6BLY7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Krt28A6BLY7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Krt28A6BLY7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Krt28A6BLY7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.98■■□□□ 1.91
Krt28A6BLY7 Gm27502-201ENSMUST00000183495 199 ntBASIC26.98■■□□□ 1.91
Krt28A6BLY7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Krt28A6BLY7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Krt28A6BLY7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Krt28A6BLY7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.97■■□□□ 1.91
Krt28A6BLY7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Krt28A6BLY7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms