Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Scarna2-201ENSMUST00000157560 414 ntBASIC27.38■■□□□ 1.97
Krt28A6BLY7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Krt28A6BLY7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Krt28A6BLY7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Krt28A6BLY7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Krt28A6BLY7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Gm11687-201ENSMUST00000118911 886 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Gm12366-201ENSMUST00000121722 873 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.35■■□□□ 1.97
Krt28A6BLY7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Gm5786-201ENSMUST00000085368 882 ntBASIC27.35■■□□□ 1.97
Krt28A6BLY7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Krt28A6BLY7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.34■■□□□ 1.97
Krt28A6BLY7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Krt28A6BLY7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Krt28A6BLY7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Krt28A6BLY7 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.32■■□□□ 1.96
Krt28A6BLY7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Krt28A6BLY7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Krt28A6BLY7 Gm9806-201ENSMUST00000051080 552 ntBASIC27.3■■□□□ 1.96
Krt28A6BLY7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
Krt28A6BLY7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Krt28A6BLY7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Krt28A6BLY7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.28■■□□□ 1.96
Krt28A6BLY7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Krt28A6BLY7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Krt28A6BLY7 Gm30023-201ENSMUST00000197970 889 ntBASIC27.27■■□□□ 1.96
Krt28A6BLY7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Krt28A6BLY7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Krt28A6BLY7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Krt28A6BLY7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Krt28A6BLY7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Krt28A6BLY7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Krt28A6BLY7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
Krt28A6BLY7 Gm16437-201ENSMUST00000025669 507 ntBASIC27.24■■□□□ 1.95
Krt28A6BLY7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Krt28A6BLY7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Krt28A6BLY7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.23■■□□□ 1.95
Krt28A6BLY7 Gm4799-201ENSMUST00000095396 657 ntBASIC27.23■■□□□ 1.95
Krt28A6BLY7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.22■■□□□ 1.95
Krt28A6BLY7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.22■■□□□ 1.95
Krt28A6BLY7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Krt28A6BLY7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Krt28A6BLY7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Krt28A6BLY7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Krt28A6BLY7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Krt28A6BLY7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Krt28A6BLY7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Krt28A6BLY7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Krt28A6BLY7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.16■■□□□ 1.94
Krt28A6BLY7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Krt28A6BLY7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Krt28A6BLY7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Krt28A6BLY7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Krt28A6BLY7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Krt28A6BLY7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
Krt28A6BLY7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.13■■□□□ 1.93
Krt28A6BLY7 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.13■■□□□ 1.93
Krt28A6BLY7 Gm7332-201ENSMUST00000118351 454 ntBASIC27.12■■□□□ 1.93
Krt28A6BLY7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.11■■□□□ 1.93
Krt28A6BLY7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.11■■□□□ 1.93
Krt28A6BLY7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Krt28A6BLY7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Krt28A6BLY7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Krt28A6BLY7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Krt28A6BLY7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Krt28A6BLY7 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.07■■□□□ 1.92
Krt28A6BLY7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Krt28A6BLY7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Krt28A6BLY7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Krt28A6BLY7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.06■■□□□ 1.92
Krt28A6BLY7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Krt28A6BLY7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Krt28A6BLY7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.05■■□□□ 1.92
Krt28A6BLY7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.05■■□□□ 1.92
Krt28A6BLY7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Krt28A6BLY7 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.04■■□□□ 1.92
Krt28A6BLY7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Krt28A6BLY7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Krt28A6BLY7 Gm15039-201ENSMUST00000118914 875 ntBASIC27.03■■□□□ 1.92
Krt28A6BLY7 Mir3960-201ENSMUST00000198213 73 ntBASIC27.02■■□□□ 1.92
Krt28A6BLY7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Krt28A6BLY7 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Krt28A6BLY7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
Krt28A6BLY7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Krt28A6BLY7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Krt28A6BLY7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Krt28A6BLY7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.98■■□□□ 1.91
Krt28A6BLY7 Gm27502-201ENSMUST00000183495 199 ntBASIC26.98■■□□□ 1.91
Krt28A6BLY7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Krt28A6BLY7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Krt28A6BLY7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Krt28A6BLY7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.97■■□□□ 1.91
Krt28A6BLY7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Krt28A6BLY7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms