Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8-1A0A075B641 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8-1A0A075B641 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav8-1A0A075B641 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav8-1A0A075B641 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8-1A0A075B641 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav8-1A0A075B641 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav8-1A0A075B641 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav8-1A0A075B641 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.97■□□□□ 0.31
Trav8-1A0A075B641 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8-1A0A075B641 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.96■□□□□ 0.31
Trav8-1A0A075B641 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8-1A0A075B641 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8-1A0A075B641 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8-1A0A075B641 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav8-1A0A075B641 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trav8-1A0A075B641 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav8-1A0A075B641 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav8-1A0A075B641 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8-1A0A075B641 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8-1A0A075B641 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8-1A0A075B641 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8-1A0A075B641 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav8-1A0A075B641 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav8-1A0A075B641 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8-1A0A075B641 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8-1A0A075B641 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8-1A0A075B641 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8-1A0A075B641 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Trav8-1A0A075B641 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav8-1A0A075B641 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8-1A0A075B641 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8-1A0A075B641 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav8-1A0A075B641 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8-1A0A075B641 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trav8-1A0A075B641 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8-1A0A075B641 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8-1A0A075B641 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav8-1A0A075B641 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.92■□□□□ 0.3
Trav8-1A0A075B641 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Trav8-1A0A075B641 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav8-1A0A075B641 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8-1A0A075B641 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8-1A0A075B641 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav8-1A0A075B641 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8-1A0A075B641 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8-1A0A075B641 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8-1A0A075B641 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8-1A0A075B641 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8-1A0A075B641 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trav8-1A0A075B641 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav8-1A0A075B641 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav8-1A0A075B641 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav8-1A0A075B641 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8-1A0A075B641 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8-1A0A075B641 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8-1A0A075B641 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav8-1A0A075B641 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav8-1A0A075B641 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Trav8-1A0A075B641 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8-1A0A075B641 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8-1A0A075B641 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8-1A0A075B641 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trav8-1A0A075B641 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8-1A0A075B641 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav8-1A0A075B641 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8-1A0A075B641 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.86■□□□□ 0.29
Trav8-1A0A075B641 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8-1A0A075B641 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8-1A0A075B641 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8-1A0A075B641 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8-1A0A075B641 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8-1A0A075B641 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav8-1A0A075B641 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8-1A0A075B641 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8-1A0A075B641 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8-1A0A075B641 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8-1A0A075B641 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav8-1A0A075B641 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav8-1A0A075B641 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8-1A0A075B641 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav8-1A0A075B641 Gm25262-201ENSMUST00000174934 133 ntBASIC16.81■□□□□ 0.28
Trav8-1A0A075B641 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trav8-1A0A075B641 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Trav8-1A0A075B641 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8-1A0A075B641 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.8■□□□□ 0.28
Trav8-1A0A075B641 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8-1A0A075B641 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav8-1A0A075B641 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav8-1A0A075B641 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8-1A0A075B641 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8-1A0A075B641 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trav8-1A0A075B641 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.79■□□□□ 0.28
Trav8-1A0A075B641 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav8-1A0A075B641 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.79■□□□□ 0.28
Trav8-1A0A075B641 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8-1A0A075B641 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav8-1A0A075B641 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.78■□□□□ 0.28
Trav8-1A0A075B641 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav8-1A0A075B641 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms