Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav7-6A0A075B640 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-6A0A075B640 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-6A0A075B640 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-6A0A075B640 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-6A0A075B640 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-6A0A075B640 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-6A0A075B640 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-6A0A075B640 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-6A0A075B640 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-6A0A075B640 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-6A0A075B640 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-6A0A075B640 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-6A0A075B640 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-6A0A075B640 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-6A0A075B640 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-6A0A075B640 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-6A0A075B640 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-6A0A075B640 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-6A0A075B640 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-6A0A075B640 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Trav7-6A0A075B640 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav7-6A0A075B640 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-6A0A075B640 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-6A0A075B640 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-6A0A075B640 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-6A0A075B640 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-6A0A075B640 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-6A0A075B640 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-6A0A075B640 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-6A0A075B640 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-6A0A075B640 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-6A0A075B640 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-6A0A075B640 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-6A0A075B640 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-6A0A075B640 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-6A0A075B640 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-6A0A075B640 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-6A0A075B640 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-6A0A075B640 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.47■□□□□ 0.23
Trav7-6A0A075B640 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-6A0A075B640 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav7-6A0A075B640 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-6A0A075B640 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav7-6A0A075B640 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-6A0A075B640 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-6A0A075B640 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Trav7-6A0A075B640 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-6A0A075B640 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-6A0A075B640 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-6A0A075B640 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-6A0A075B640 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-6A0A075B640 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-6A0A075B640 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav7-6A0A075B640 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-6A0A075B640 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.41■□□□□ 0.22
Trav7-6A0A075B640 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav7-6A0A075B640 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav7-6A0A075B640 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-6A0A075B640 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-6A0A075B640 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav7-6A0A075B640 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav7-6A0A075B640 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Trav7-6A0A075B640 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-6A0A075B640 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-6A0A075B640 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav7-6A0A075B640 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.38■□□□□ 0.21
Trav7-6A0A075B640 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav7-6A0A075B640 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav7-6A0A075B640 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav7-6A0A075B640 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav7-6A0A075B640 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-6A0A075B640 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-6A0A075B640 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav7-6A0A075B640 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav7-6A0A075B640 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-6A0A075B640 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-6A0A075B640 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-6A0A075B640 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Trav7-6A0A075B640 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav7-6A0A075B640 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav7-6A0A075B640 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav7-6A0A075B640 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7-6A0A075B640 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav7-6A0A075B640 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.32■□□□□ 0.2
Trav7-6A0A075B640 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav7-6A0A075B640 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trav7-6A0A075B640 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Trav7-6A0A075B640 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.31■□□□□ 0.2
Trav7-6A0A075B640 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms