Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC021106.1-201ENST00000509020 1058 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 HPRT1P1-201ENST00000509498 657 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC083906.4-201ENST00000514634 987 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 IGHV7-40-201ENST00000520963 296 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AP001636.2-201ENST00000525517 696 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 NDUFS5P6-201ENST00000529136 295 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 OR4N1P-201ENST00000554847 949 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC090774.2-201ENST00000584708 322 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AP002884.5-201ENST00000595053 1132 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC005377.1-201ENST00000605126 456 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AL645933.2-201ENST00000606743 1207 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC016394.1-201ENST00000608444 833 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC243772.3-202ENST00000609662 1148 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC012488.1-201ENST00000611221 640 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 FRG1EP-201ENST00000634469 770 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC090897.3-201ENST00000636973 1157 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC241585.4-201ENST00000640951 686 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC008691.1-209ENST00000642094 814 ntBASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
TRAIPQ9BWF2 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 ZNF733P-202ENST00000444809 1573 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC090181.3-201ENST00000624777 1514 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AL133268.1-201ENST00000405676 1401 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 SUCLA2P2-201ENST00000417269 1309 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 MIR181C-201ENST00000384881 110 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 MRPL35P2-201ENST00000448009 511 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 ZNF886P-201ENST00000450781 723 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 HSPE1P22-201ENST00000456856 327 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 RN7SL213P-201ENST00000463482 317 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC093752.1-206ENST00000511823 336 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 RNA5SP303-201ENST00000516192 130 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC079598.4-201ENST00000549647 265 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC090607.2-201ENST00000560331 695 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC023824.3-201ENST00000569003 562 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 EIF4A1P9-201ENST00000576035 1207 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC019226.2-201ENST00000625973 424 ntBASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
TRAIPQ9BWF2 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms