Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HLA-DOAP06340 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.19□□□□□ -1.1
HLA-DOAP06340 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
HLA-DOAP06340 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
HLA-DOAP06340 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
HLA-DOAP06340 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AL512329.1-201ENST00000404600 1592 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC018992.1-201ENST00000523778 2149 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 Z99129.4-201ENST00000624649 2435 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 RNU1-5P-201ENST00000362684 144 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 RN7SKP62-201ENST00000384539 329 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 RNA5SP155-201ENST00000411154 129 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 SMARCE1P1-201ENST00000417747 1186 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC004890.1-201ENST00000461005 181 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 RPS3AP49-201ENST00000472161 790 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 PTTG3P-201ENST00000521862 606 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC006518.1-201ENST00000541449 943 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC016252.1-201ENST00000609721 474 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 MIR6503-201ENST00000622884 86 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 CTH-203ENST00000411986 2044 ntTSL 2 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.18□□□□□ -1.1
HLA-DOAP06340 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 AC015871.4-201ENST00000624650 2260 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
HLA-DOAP06340 CDY7P-201ENST00000429883 1604 ntBASIC8.18□□□□□ -1.1
HLA-DOAP06340 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 AC010894.1-201ENST00000313760 361 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 SNORA7A-201ENST00000384765 139 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 NPM1P23-201ENST00000440193 849 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 ZNF736P11Y-201ENST00000442535 1213 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 ZNF736P12Y-201ENST00000443152 1243 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 RPS18P1-201ENST00000447840 458 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 AL121578.2-201ENST00000448797 447 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 AL034399.1-201ENST00000451535 380 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 ZNF736P4Y-201ENST00000454995 1243 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 SETP17-201ENST00000534163 817 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 OR5BK1P-201ENST00000550421 823 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
HLA-DOAP06340 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 AC027559.1-201ENST00000636288 271 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 AL596275.2-203ENST00000641951 371 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.17□□□□□ -1.1
HLA-DOAP06340 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.17□□□□□ -1.1
HLA-DOAP06340 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms