Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Syne4Q8CII8 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.2□□□□□ -1.74
Syne4Q8CII8 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
Syne4Q8CII8 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.2□□□□□ -1.74
Syne4Q8CII8 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm23744-201ENSMUST00000104231 149 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm14101-201ENSMUST00000121502 473 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm13406-201ENSMUST00000121991 256 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm28263-201ENSMUST00000185884 400 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm28623-201ENSMUST00000187219 192 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Npn2-202ENSMUST00000189275 235 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm44076-201ENSMUST00000203072 520 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm46138-201ENSMUST00000215294 426 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 AC116589.4-201ENSMUST00000222390 216 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm18441-201ENSMUST00000223539 617 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.19□□□□□ -1.74
Syne4Q8CII8 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Syne4Q8CII8 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Syne4Q8CII8 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm24273-201ENSMUST00000102332 164 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm11420-201ENSMUST00000120047 402 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm22597-201ENSMUST00000157602 80 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm26001-201ENSMUST00000157989 103 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm28390-201ENSMUST00000185212 700 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm37119-201ENSMUST00000195691 389 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm17906-201ENSMUST00000202480 901 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm44927-201ENSMUST00000207573 716 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm9762-201ENSMUST00000036976 444 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Syne4Q8CII8 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne4Q8CII8 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Syne4Q8CII8 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne4Q8CII8 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm6274-201ENSMUST00000118173 797 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm12878-201ENSMUST00000118744 332 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm11430-201ENSMUST00000121317 217 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne4Q8CII8 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm8392-201ENSMUST00000185647 835 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm28148-201ENSMUST00000186924 697 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.17□□□□□ -1.74
Syne4Q8CII8 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm37732-201ENSMUST00000194377 316 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.17□□□□□ -1.74
Syne4Q8CII8 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm22508-201ENSMUST00000082772 110 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Syne4Q8CII8 AC115891.1-201ENSMUST00000215798 1755 ntBASIC4.17□□□□□ -1.74
Syne4Q8CII8 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Syne4Q8CII8 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Syne4Q8CII8 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms