Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm44322-201ENSMUST00000196830 115 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm44485-201ENSMUST00000199569 137 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm45005-201ENSMUST00000206640 157 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm3338-201ENSMUST00000220982 269 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm6462-201ENSMUST00000081488 304 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm22997-201ENSMUST00000082845 107 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm25140-201ENSMUST00000083254 140 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col6a1Q04857 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a1Q04857 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm12155-201ENSMUST00000121267 160 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm15212-201ENSMUST00000122403 466 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm25264-201ENSMUST00000158519 117 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm17109-201ENSMUST00000163985 358 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm20526-201ENSMUST00000173416 158 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm42458-201ENSMUST00000201914 369 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.01□□□□□ -1.61
Col6a1Q04857 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a1Q04857 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a1Q04857 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.01□□□□□ -1.61
Col6a1Q04857 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a1Q04857 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col6a1Q04857 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col6a1Q04857 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a1Q04857 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Col6a1Q04857 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col6a1Q04857 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a1Q04857 Gm26367-201ENSMUST00000104165 132 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a1Q04857 Gm10552-201ENSMUST00000113396 372 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Gm12782-201ENSMUST00000117519 727 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5□□□□□ -1.61
Col6a1Q04857 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5□□□□□ -1.61
Col6a1Q04857 Gm26005-201ENSMUST00000158802 134 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Col6a1Q04857 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Gm27165-201ENSMUST00000183951 232 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Col6a1Q04857 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5□□□□□ -1.61
Col6a1Q04857 Gm43828-201ENSMUST00000196890 639 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC5□□□□□ -1.61
Col6a1Q04857 Gm44059-201ENSMUST00000204048 351 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a1Q04857 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a1Q04857 mt-Ti-201ENSMUST00000082393 69 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Gm22577-201ENSMUST00000083731 109 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Gm15624-203ENSMUST00000204811 3402 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Col6a1Q04857 Gm37514-201ENSMUST00000194512 2753 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col6a1Q04857 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Gm43871-201ENSMUST00000204931 1955 ntBASIC5□□□□□ -1.61
Col6a1Q04857 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col6a1Q04857 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col6a1Q04857 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col6a1Q04857 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col6a1Q04857 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a1Q04857 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Col6a1Q04857 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm15195-201ENSMUST00000118775 263 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm11849-201ENSMUST00000121293 261 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm22482-201ENSMUST00000122563 359 ntBASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col6a1Q04857 Gm23554-201ENSMUST00000157818 110 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms