Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim35Q8C006 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.3□□□□□ -1.4
Trim35Q8C006 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim35Q8C006 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim35Q8C006 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Trim35Q8C006 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.3□□□□□ -1.4
Trim35Q8C006 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim35Q8C006 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim35Q8C006 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim35Q8C006 AC159625.1-201ENSMUST00000220994 2625 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm37777-201ENSMUST00000195546 3366 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm38071-201ENSMUST00000195792 3378 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim35Q8C006 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Trim35Q8C006 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm23898-201ENSMUST00000158111 103 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm23071-201ENSMUST00000158242 115 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm24224-201ENSMUST00000158828 258 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm23632-201ENSMUST00000175289 125 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm5285-201ENSMUST00000193089 666 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm37217-201ENSMUST00000194017 3521 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim35Q8C006 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 n-R5s160-201ENSMUST00000083096 120 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim35Q8C006 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.29□□□□□ -1.4
Trim35Q8C006 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim35Q8C006 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim35Q8C006 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm43877-201ENSMUST00000205029 2238 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm24272-201ENSMUST00000102329 98 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm11462-201ENSMUST00000117749 562 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm11367-201ENSMUST00000117802 120 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm15861-201ENSMUST00000120979 339 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm25220-201ENSMUST00000157546 95 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm22569-201ENSMUST00000175545 124 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm37135-201ENSMUST00000192652 534 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim35Q8C006 n-R5s56-201ENSMUST00000082521 105 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm25257-201ENSMUST00000083907 110 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Trim35Q8C006 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim35Q8C006 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.28□□□□□ -1.4
Trim35Q8C006 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.4
Trim35Q8C006 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim35Q8C006 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim35Q8C006 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim35Q8C006 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim35Q8C006 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm14513-201ENSMUST00000117403 123 ntBASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm24718-201ENSMUST00000157521 136 ntBASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm6055-201ENSMUST00000180532 378 ntBASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm27271-201ENSMUST00000183509 170 ntBASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm34139-201ENSMUST00000196166 294 ntBASIC6.27□□□□□ -1.41
Trim35Q8C006 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm23293-201ENSMUST00000082552 104 ntBASIC6.27□□□□□ -1.41
Trim35Q8C006 Gm26442-201ENSMUST00000082588 153 ntBASIC6.27□□□□□ -1.41
Trim35Q8C006 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim35Q8C006 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim35Q8C006 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Trim35Q8C006 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms