Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm22826-201ENSMUST00000083774 165 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm25207-201ENSMUST00000093745 107 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm24469-201ENSMUST00000104487 131 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm15905-201ENSMUST00000137042 298 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm24690-201ENSMUST00000157759 97 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm24188-201ENSMUST00000157980 108 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm24217-201ENSMUST00000158260 133 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm43855-201ENSMUST00000197462 507 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 AC153646.2-201ENSMUST00000220516 109 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm19786-201ENSMUST00000222589 580 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Gm23845-201ENSMUST00000083834 152 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Sh3rf1Q69ZI1 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm25537-201ENSMUST00000103851 109 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm12760-201ENSMUST00000117861 482 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm15026-201ENSMUST00000119219 458 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm11849-201ENSMUST00000121293 261 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm11384-201ENSMUST00000121376 303 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm14298-201ENSMUST00000139032 237 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm16356-201ENSMUST00000143300 169 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm24664-201ENSMUST00000158939 100 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Mir6943-201ENSMUST00000185186 66 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm23925-202ENSMUST00000188429 132 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm8939-201ENSMUST00000192577 964 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm38060-201ENSMUST00000194822 464 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm10916-201ENSMUST00000080330 483 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm22220-201ENSMUST00000082671 149 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm24166-201ENSMUST00000082724 135 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.8□□□□□ -1.64
Sh3rf1Q69ZI1 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm12285-201ENSMUST00000117347 233 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm11822-201ENSMUST00000119177 415 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm11790-201ENSMUST00000119569 455 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Trav20-201ENSMUST00000142754 347 ntBASIC4.79□□□□□ -1.64
Sh3rf1Q69ZI1 Gm23120-201ENSMUST00000157654 287 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms