Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm6436-201ENSMUST00000077163 451 ntBASIC6.36□□□□□ -1.39
Trim35Q8C006 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim35Q8C006 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim35Q8C006 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim35Q8C006 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim35Q8C006 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim35Q8C006 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Trim35Q8C006 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim35Q8C006 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim35Q8C006 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim35Q8C006 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim35Q8C006 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim35Q8C006 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.36□□□□□ -1.39
Trim35Q8C006 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm37236-201ENSMUST00000193670 3249 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Trim35Q8C006 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm27934-201ENSMUST00000158795 63 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm26160-201ENSMUST00000158965 63 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm27355-201ENSMUST00000185045 128 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm18665-201ENSMUST00000189783 270 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm37380-201ENSMUST00000193752 397 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm10048-201ENSMUST00000194196 372 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm43744-201ENSMUST00000196387 688 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm3829-201ENSMUST00000222362 619 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 AC134254.5-201ENSMUST00000223436 400 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm22421-201ENSMUST00000083058 107 ntBASIC6.35□□□□□ -1.39
Trim35Q8C006 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim35Q8C006 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim35Q8C006 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Trim35Q8C006 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim35Q8C006 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
Trim35Q8C006 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim35Q8C006 Gm8473-201ENSMUST00000176697 1885 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Trim35Q8C006 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm38106-201ENSMUST00000194107 2534 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm24951-201ENSMUST00000102182 109 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Mir669d-201ENSMUST00000104644 121 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm15181-201ENSMUST00000120142 177 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm12936-201ENSMUST00000121439 301 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm22958-201ENSMUST00000122512 184 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm23121-201ENSMUST00000157653 173 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm25374-201ENSMUST00000158158 101 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm26353-201ENSMUST00000158224 255 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm37361-201ENSMUST00000194345 132 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm43028-201ENSMUST00000202561 481 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC6.34□□□□□ -1.39
Trim35Q8C006 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC6.34□□□□□ -1.39
Trim35Q8C006 AC160976.1-201ENSMUST00000215092 148 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm8288-201ENSMUST00000223406 593 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Mir7-1-201ENSMUST00000083500 108 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Trim35Q8C006 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
Trim35Q8C006 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.39
Trim35Q8C006 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Trim35Q8C006 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Trim35Q8C006 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.34□□□□□ -1.39
Trim35Q8C006 Zfp933-201ENSMUST00000105718 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Trim35Q8C006 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Trim35Q8C006 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Trim35Q8C006 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Trim35Q8C006 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Trim35Q8C006 Gm10400-201ENSMUST00000203920 3835 ntBASIC6.33□□□□□ -1.4
Trim35Q8C006 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim35Q8C006 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim35Q8C006 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.33□□□□□ -1.4
Trim35Q8C006 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim35Q8C006 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim35Q8C006 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim35Q8C006 Gm26144-201ENSMUST00000104475 132 ntBASIC6.33□□□□□ -1.4
Trim35Q8C006 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim35Q8C006 Gm11799-201ENSMUST00000116110 460 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms