Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 MIR4786-201ENST00000583954 80 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AL137190.1-201ENST00000603288 282 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC103724.4-201ENST00000605981 292 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC068234.2-201ENST00000619646 522 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AC087072.2-201ENST00000621060 682 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AL359742.1-201ENST00000622497 540 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 RPL36AP21-202ENST00000639134 430 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 BIN2P2-201ENST00000503900 1303 ntBASIC6.68□□□□□ -1.34
SNX18Q96RF0 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SNX18Q96RF0 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
SNX18Q96RF0 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 AC127070.3-201ENST00000503695 3263 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 FUNDC2P3-201ENST00000334716 533 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 OR7E25P-201ENST00000344844 931 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 Y_RNA.110-201ENST00000363220 99 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 EIF4A1P13-201ENST00000415667 230 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 DDX11L10-201ENST00000430178 571 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 RPS14P7-201ENST00000473701 448 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 MORF4L2P1-201ENST00000503761 858 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 AC055733.3-201ENST00000505214 523 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 AC095059.2-201ENST00000510601 933 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 SNX18P27-201ENST00000523611 779 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 SAA3P-201ENST00000533267 365 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 NUTF2P2-201ENST00000551207 384 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 OR4F28P-201ENST00000559128 938 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 AC105275.2-201ENST00000567907 711 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 MIR5705-201ENST00000579870 89 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 MIR4642-201ENST00000583943 82 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 OR4F8P-201ENST00000589943 937 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 AL022238.3-201ENST00000609279 443 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 SNORA43.5-201ENST00000631270 138 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 AC009452.1-201ENST00000640823 606 ntBASIC6.67□□□□□ -1.34
SNX18Q96RF0 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.67□□□□□ -1.34
SNX18Q96RF0 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SNX18Q96RF0 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms