Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm37802-201ENSMUST00000194998 2643 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm9850-201ENSMUST00000117916 227 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm15267-201ENSMUST00000120888 464 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm13132-201ENSMUST00000121194 472 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm11430-201ENSMUST00000121317 217 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm24968-201ENSMUST00000179817 107 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm28304-201ENSMUST00000185977 312 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm18357-201ENSMUST00000188184 580 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm29256-201ENSMUST00000189094 312 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm28484-201ENSMUST00000190606 312 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm18551-201ENSMUST00000195594 642 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm44720-201ENSMUST00000206076 260 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm44655-201ENSMUST00000207768 423 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm26263-201ENSMUST00000083281 164 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm22155-201ENSMUST00000083836 162 ntBASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Prpf40bQ80W14 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm43527-201ENSMUST00000198749 3178 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Mir667-201ENSMUST00000102441 92 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm5757-201ENSMUST00000117494 528 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm23214-201ENSMUST00000122716 157 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm22601-201ENSMUST00000157595 250 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm3851-201ENSMUST00000168653 318 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm23141-201ENSMUST00000178682 94 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm27883-201ENSMUST00000183941 102 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm8600-201ENSMUST00000186320 905 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm21673-201ENSMUST00000186640 436 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm21135-201ENSMUST00000189023 436 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm19193-201ENSMUST00000190263 590 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm8939-201ENSMUST00000192577 964 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm38076-201ENSMUST00000193889 450 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm19126-201ENSMUST00000207896 509 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm45387-201ENSMUST00000209792 632 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm6012-201ENSMUST00000210821 730 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm3086-202ENSMUST00000221248 310 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm23645-201ENSMUST00000083228 108 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Prpf40bQ80W14 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Mir592-201ENSMUST00000102113 96 ntBASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Prpf40bQ80W14 Gm22269-201ENSMUST00000104002 130 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms