Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
Gm4559A4IF42 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC1□□□□□ -2.25
Gm4559A4IF42 Adamts4-201ENSMUST00000111314 3761 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Slc12a4-202ENSMUST00000116429 3755 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
Gm4559A4IF42 Gm44433-201ENSMUST00000203540 4832 ntBASIC1□□□□□ -2.25
Gm4559A4IF42 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC1□□□□□ -2.25
Gm4559A4IF42 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC1□□□□□ -2.25
Gm4559A4IF42 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1□□□□□ -2.25
Gm4559A4IF42 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC1□□□□□ -2.25
Gm4559A4IF42 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
Gm4559A4IF42 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC1□□□□□ -2.25
Gm4559A4IF42 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC1□□□□□ -2.25
Gm4559A4IF42 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Gm4559A4IF42 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Hinfp-205ENSMUST00000216508 5333 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 L3mbtl2-204ENSMUST00000172748 3368 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Tert-201ENSMUST00000022104 4313 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Gm35608-201ENSMUST00000218472 2370 ntBASIC0.99□□□□□ -2.25
Gm4559A4IF42 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Thsd1-202ENSMUST00000160585 3276 ntTSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Ptprs-211ENSMUST00000223859 5588 ntBASIC0.99□□□□□ -2.25
Gm4559A4IF42 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Rpa1-202ENSMUST00000092907 5077 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC0.99□□□□□ -2.25
Gm4559A4IF42 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Odf2-210ENSMUST00000113765 3188 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Nedd4l-204ENSMUST00000224347 3150 ntBASIC0.99□□□□□ -2.25
Gm4559A4IF42 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Robo2-210ENSMUST00000226478 8059 ntBASIC0.99□□□□□ -2.25
Gm4559A4IF42 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Gm4559A4IF42 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms