Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm11936-201ENSMUST00000118323 160 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm14013-201ENSMUST00000119006 270 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm15745-201ENSMUST00000119807 115 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm13132-201ENSMUST00000121194 472 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm26102-201ENSMUST00000157251 284 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm16318-201ENSMUST00000162402 601 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Mir6400-201ENSMUST00000184870 92 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm38076-201ENSMUST00000193889 450 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm7040-201ENSMUST00000223271 443 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm23677-201ENSMUST00000083156 104 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm22740-201ENSMUST00000083439 109 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm22577-201ENSMUST00000083731 109 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm9386-201ENSMUST00000095195 381 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Olfr713-201ENSMUST00000098139 975 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Pcdh1F7BJK1 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Mir667-201ENSMUST00000102441 92 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm23274-201ENSMUST00000104056 130 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm12486-201ENSMUST00000120887 541 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm14287-201ENSMUST00000121060 117 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm11849-201ENSMUST00000121293 261 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm24409-201ENSMUST00000157881 152 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm28957-201ENSMUST00000190174 373 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm8745-201ENSMUST00000207846 782 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm44853-201ENSMUST00000209070 250 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm18258-201ENSMUST00000210413 542 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm18904-201ENSMUST00000218756 329 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm6065-201ENSMUST00000081336 492 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Snora52-201ENSMUST00000082732 137 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.3□□□□□ -1.72
Pcdh1F7BJK1 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Mir592-201ENSMUST00000102113 96 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm12893-201ENSMUST00000121732 275 ntBASIC4.29□□□□□ -1.72
Pcdh1F7BJK1 Gm22718-201ENSMUST00000122701 315 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms