Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1S4R1E0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1S4R1E0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1S4R1E0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1S4R1E0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1S4R1E0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb1S4R1E0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.67■□□□□ 0.1
H2afb1S4R1E0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Rab3c-203ENSMUST00000224180 967 ntBASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb1S4R1E0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb1S4R1E0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Gm26524-201ENSMUST00000192339 390 ntBASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb1S4R1E0 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H2afb1S4R1E0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms