Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.9■□□□□ 0.46
Smarcb1Q9Z0H3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Gm11355-201ENSMUST00000121120 306 ntBASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Gm33142-201ENSMUST00000193913 867 ntBASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Gm21362-201ENSMUST00000194272 928 ntBASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcb1Q9Z0H3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Actl10-202ENSMUST00000226583 1501 ntBASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcb1Q9Z0H3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcb1Q9Z0H3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcb1Q9Z0H3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 Gm7367-201ENSMUST00000057611 492 ntBASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcb1Q9Z0H3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcb1Q9Z0H3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms