Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Gm9013-201ENSMUST00000132939 882 ntBASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Mir3081-201ENSMUST00000175305 84 ntBASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col13a1Q9R1N9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Grk6-206ENSMUST00000224995 2971 ntBASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col13a1Q9R1N9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Gm18115-201ENSMUST00000221209 621 ntBASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Col13a1Q9R1N9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Gm13474-201ENSMUST00000122466 815 ntBASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 AW822252-206ENSMUST00000208904 237 ntBASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.61□□□□□ -0.07
Col13a1Q9R1N9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms