Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfwd2Q9R1A8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfwd2Q9R1A8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Mir5133-201ENSMUST00000174955 77 ntBASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rfwd2Q9R1A8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfwd2Q9R1A8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.77■□□□□ 0.43
Rfwd2Q9R1A8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfwd2Q9R1A8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfwd2Q9R1A8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfwd2Q9R1A8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rfwd2Q9R1A8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms