Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpf2Q9JJ80 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpf2Q9JJ80 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpf2Q9JJ80 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpf2Q9JJ80 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Rpf2Q9JJ80 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.34■□□□□ 0.53
Rpf2Q9JJ80 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpf2Q9JJ80 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpf2Q9JJ80 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpf2Q9JJ80 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpf2Q9JJ80 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpf2Q9JJ80 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.33■□□□□ 0.52
Rpf2Q9JJ80 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpf2Q9JJ80 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpf2Q9JJ80 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpf2Q9JJ80 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpf2Q9JJ80 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpf2Q9JJ80 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rpf2Q9JJ80 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Gm6576-201ENSMUST00000169678 883 ntBASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Gm10138-203ENSMUST00000206952 366 ntBASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpf2Q9JJ80 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rpf2Q9JJ80 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms