Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubb3Q9ERD7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubb3Q9ERD7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubb3Q9ERD7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Tubb3Q9ERD7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tubb3Q9ERD7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tubb3Q9ERD7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Tubb3Q9ERD7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tubb3Q9ERD7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Tubb3Q9ERD7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Mir8112-201ENSMUST00000184382 131 ntBASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tubb3Q9ERD7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tubb3Q9ERD7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Gm715-201ENSMUST00000117865 831 ntBASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubb3Q9ERD7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Gm10138-203ENSMUST00000206952 366 ntBASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tubb3Q9ERD7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Mir1199-201ENSMUST00000117015 119 ntBASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubb3Q9ERD7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms