Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rrp8Q9DB85 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rrp8Q9DB85 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rrp8Q9DB85 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.89■□□□□ 0.3
Rrp8Q9DB85 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rrp8Q9DB85 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Actl10-202ENSMUST00000226583 1501 ntBASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Mir770-201ENSMUST00000103252 94 ntBASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Gm37722-201ENSMUST00000193757 208 ntBASIC16.88■□□□□ 0.29
Rrp8Q9DB85 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rrp8Q9DB85 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Golph3-205ENSMUST00000228671 2842 ntBASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Gm27742-201ENSMUST00000184667 60 ntBASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Gm45328-201ENSMUST00000210942 917 ntBASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rrp8Q9DB85 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rrp8Q9DB85 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Gm27357-201ENSMUST00000183754 135 ntBASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.85■□□□□ 0.29
Rrp8Q9DB85 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rrp8Q9DB85 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms