Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim42Q9D2H5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim42Q9D2H5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim42Q9D2H5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim42Q9D2H5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim42Q9D2H5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Trim42Q9D2H5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim42Q9D2H5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim42Q9D2H5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Gm43017-201ENSMUST00000198296 752 ntBASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Reep4-203ENSMUST00000226563 1444 ntBASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim42Q9D2H5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim42Q9D2H5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim42Q9D2H5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim42Q9D2H5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.23■□□□□ 0.35
Trim42Q9D2H5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms