Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift27Q9D0P8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.81■□□□□ 0.12
Ift27Q9D0P8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ift27Q9D0P8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Ift27Q9D0P8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Gm13146-201ENSMUST00000118508 780 ntBASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Gm13534-201ENSMUST00000121169 513 ntBASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Gm26833-201ENSMUST00000180899 440 ntBASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.79■□□□□ 0.12
Ift27Q9D0P8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Ift27Q9D0P8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ift27Q9D0P8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms