Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ssr1Q9CY50 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Flg-201ENSMUST00000050758 1488 ntBASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.71■□□□□ 0.59
Ssr1Q9CY50 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Gm15039-201ENSMUST00000118914 875 ntBASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Gm26524-201ENSMUST00000192339 390 ntBASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Zfp783-201ENSMUST00000095946 670 ntBASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ssr1Q9CY50 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ssr1Q9CY50 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Gm37179-201ENSMUST00000194862 823 ntBASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ssr1Q9CY50 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ssr1Q9CY50 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms