Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf135Q9CWS1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf135Q9CWS1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf135Q9CWS1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf135Q9CWS1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf135Q9CWS1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.99■□□□□ 0.47
Rnf135Q9CWS1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf135Q9CWS1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Gm7977-201ENSMUST00000193787 748 ntBASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rnf135Q9CWS1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf135Q9CWS1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Dio3-201ENSMUST00000097228 1449 ntBASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf135Q9CWS1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf135Q9CWS1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Gm13836-201ENSMUST00000121159 501 ntBASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.93■□□□□ 0.46
Rnf135Q9CWS1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms