Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tlr3Q99MB1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Gm24841-201ENSMUST00000158676 357 ntBASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tlr3Q99MB1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tlr3Q99MB1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Tlr3Q99MB1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tlr3Q99MB1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tlr3Q99MB1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tlr3Q99MB1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.52■□□□□ 0.55
Tlr3Q99MB1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tlr3Q99MB1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tlr3Q99MB1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tlr3Q99MB1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Gm9987-201ENSMUST00000069768 567 ntBASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.5■□□□□ 0.55
Tlr3Q99MB1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tlr3Q99MB1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tlr3Q99MB1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tlr3Q99MB1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tlr3Q99MB1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Tlr3Q99MB1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tlr3Q99MB1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms