Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smc1bQ920F6 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.89■□□□□ 0.77
Smc1bQ920F6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.88■□□□□ 0.77
Smc1bQ920F6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smc1bQ920F6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc1bQ920F6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc1bQ920F6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.87■□□□□ 0.77
Smc1bQ920F6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Smc1bQ920F6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Smc1bQ920F6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.86■□□□□ 0.77
Smc1bQ920F6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smc1bQ920F6 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.85■□□□□ 0.77
Smc1bQ920F6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Gm38027-201ENSMUST00000192315 235 ntBASIC19.85■□□□□ 0.77
Smc1bQ920F6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.85■□□□□ 0.77
Smc1bQ920F6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smc1bQ920F6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Smc1bQ920F6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Smc1bQ920F6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc1bQ920F6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc1bQ920F6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc1bQ920F6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc1bQ920F6 Gm7461-201ENSMUST00000058918 827 ntBASIC19.84■□□□□ 0.77
Smc1bQ920F6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smc1bQ920F6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smc1bQ920F6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Smc1bQ920F6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc1bQ920F6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Smc1bQ920F6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smc1bQ920F6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc1bQ920F6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Smc1bQ920F6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smc1bQ920F6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smc1bQ920F6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Smc1bQ920F6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.83■□□□□ 0.76
Smc1bQ920F6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc1bQ920F6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smc1bQ920F6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smc1bQ920F6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms