Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Gm12896-201ENSMUST00000118430 226 ntBASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb4Q91XZ6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb4Q91XZ6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb4Q91XZ6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Gm10138-203ENSMUST00000206952 366 ntBASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb4Q91XZ6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Gm11249-201ENSMUST00000117071 859 ntBASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Mir6349-201ENSMUST00000184059 97 ntBASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb4Q91XZ6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms