Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb6Q91XZ4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Gm37025-201ENSMUST00000195159 829 ntBASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb6Q91XZ4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb6Q91XZ4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Gm12085-201ENSMUST00000119263 940 ntBASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Gm38027-201ENSMUST00000192315 235 ntBASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdhb6Q91XZ4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Pcdhb6Q91XZ4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb6Q91XZ4 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.7■□□□□ 0.42
Pcdhb6Q91XZ4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Pcdhb6Q91XZ4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Pcdhb6Q91XZ4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb6Q91XZ4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb6Q91XZ4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb6Q91XZ4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pcdhb6Q91XZ4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdhb6Q91XZ4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Gm715-201ENSMUST00000117865 831 ntBASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdhb6Q91XZ4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhb6Q91XZ4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms