Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Gm21559-201ENSMUST00000220638 855 ntBASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Gm5867-201ENSMUST00000063197 592 ntBASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Gm8587-201ENSMUST00000076538 843 ntBASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.15■□□□□ 0.34
Pcdhga6Q91XY2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhga6Q91XY2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhga6Q91XY2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Gm43514-201ENSMUST00000198852 424 ntBASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga6Q91XY2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Gm29518-201ENSMUST00000190858 372 ntBASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhga6Q91XY2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga6Q91XY2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga6Q91XY2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga6Q91XY2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms