Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TraipQ8VIG6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TraipQ8VIG6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TraipQ8VIG6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Gm18958-201ENSMUST00000174258 762 ntBASIC18.35■□□□□ 0.53
TraipQ8VIG6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Gm7367-201ENSMUST00000057611 492 ntBASIC18.35■□□□□ 0.53
TraipQ8VIG6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TraipQ8VIG6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.34■□□□□ 0.53
TraipQ8VIG6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TraipQ8VIG6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TraipQ8VIG6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TraipQ8VIG6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TraipQ8VIG6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TraipQ8VIG6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TraipQ8VIG6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.33■□□□□ 0.52
TraipQ8VIG6 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.33■□□□□ 0.52
TraipQ8VIG6 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.33■□□□□ 0.52
TraipQ8VIG6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TraipQ8VIG6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TraipQ8VIG6 Gm10566-201ENSMUST00000086739 996 ntBASIC18.33■□□□□ 0.52
TraipQ8VIG6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TraipQ8VIG6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TraipQ8VIG6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TraipQ8VIG6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TraipQ8VIG6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
TraipQ8VIG6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TraipQ8VIG6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Gm29518-201ENSMUST00000190858 372 ntBASIC18.32■□□□□ 0.52
TraipQ8VIG6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TraipQ8VIG6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms