Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim60Q8VI40 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
Trim60Q8VI40 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim60Q8VI40 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trim60Q8VI40 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim60Q8VI40 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim60Q8VI40 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim60Q8VI40 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim60Q8VI40 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim60Q8VI40 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim60Q8VI40 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim60Q8VI40 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim60Q8VI40 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Trim60Q8VI40 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Gm5408-201ENSMUST00000197998 747 ntBASIC17.88■□□□□ 0.45
Trim60Q8VI40 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.88■□□□□ 0.45
Trim60Q8VI40 Mtag2-201ENSMUST00000058665 714 ntBASIC17.88■□□□□ 0.45
Trim60Q8VI40 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim60Q8VI40 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.87■□□□□ 0.45
Trim60Q8VI40 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim60Q8VI40 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim60Q8VI40 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim60Q8VI40 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim60Q8VI40 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim60Q8VI40 Gm15375-201ENSMUST00000119510 849 ntBASIC17.86■□□□□ 0.45
Trim60Q8VI40 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim60Q8VI40 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.86■□□□□ 0.45
Trim60Q8VI40 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim60Q8VI40 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim60Q8VI40 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim60Q8VI40 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim60Q8VI40 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim60Q8VI40 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.85■□□□□ 0.45
Trim60Q8VI40 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.85■□□□□ 0.45
Trim60Q8VI40 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim60Q8VI40 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim60Q8VI40 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim60Q8VI40 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim60Q8VI40 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms