Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Gm9987-201ENSMUST00000069768 567 ntBASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Vps4aQ8VEJ9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vps4aQ8VEJ9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vps4aQ8VEJ9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Mir1199-201ENSMUST00000117015 119 ntBASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps4aQ8VEJ9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Gm2399-201ENSMUST00000104944 225 ntBASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.71■□□□□ 0.27
Vps4aQ8VEJ9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps4aQ8VEJ9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps4aQ8VEJ9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps4aQ8VEJ9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps4aQ8VEJ9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps4aQ8VEJ9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps4aQ8VEJ9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps4aQ8VEJ9 Gm11249-201ENSMUST00000117071 859 ntBASIC16.7■□□□□ 0.26
Vps4aQ8VEJ9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.7■□□□□ 0.26
Vps4aQ8VEJ9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms