Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Gm12350-201ENSMUST00000121208 462 ntBASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Lmcd1Q8VEE1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lmcd1Q8VEE1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lmcd1Q8VEE1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lmcd1Q8VEE1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lmcd1Q8VEE1 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.33■□□□□ 0.53
Lmcd1Q8VEE1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Gm43575-201ENSMUST00000196420 516 ntBASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Gm5364-201ENSMUST00000216789 889 ntBASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lmcd1Q8VEE1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lmcd1Q8VEE1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Gm11779-201ENSMUST00000118541 368 ntBASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lmcd1Q8VEE1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Gm10060-201ENSMUST00000212002 111 ntBASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lmcd1Q8VEE1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lmcd1Q8VEE1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lmcd1Q8VEE1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lmcd1Q8VEE1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lmcd1Q8VEE1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lmcd1Q8VEE1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lmcd1Q8VEE1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.28■□□□□ 0.52
Lmcd1Q8VEE1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.28■□□□□ 0.52
Lmcd1Q8VEE1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lmcd1Q8VEE1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.28■□□□□ 0.52
Lmcd1Q8VEE1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms