Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Gm18959-201ENSMUST00000208954 655 ntBASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.28■□□□□ 0.2
Ndc1Q8VCB1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc1Q8VCB1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.27■□□□□ 0.19
Ndc1Q8VCB1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ndc1Q8VCB1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ndc1Q8VCB1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ndc1Q8VCB1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ndc1Q8VCB1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ndc1Q8VCB1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms