Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf113a1Q8R3P8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf113a1Q8R3P8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf113a1Q8R3P8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf113a1Q8R3P8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf113a1Q8R3P8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf113a1Q8R3P8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf113a1Q8R3P8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf113a1Q8R3P8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Gm37055-201ENSMUST00000191866 133 ntBASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Zfp783-201ENSMUST00000095946 670 ntBASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf113a1Q8R3P8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf113a1Q8R3P8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Gm15565-201ENSMUST00000118890 427 ntBASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf113a1Q8R3P8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf113a1Q8R3P8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms