Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afjQ8R1M2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Gm12933-201ENSMUST00000120203 872 ntBASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Gm38285-201ENSMUST00000192928 922 ntBASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Gm5408-201ENSMUST00000197998 747 ntBASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Rab3c-203ENSMUST00000224180 967 ntBASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afjQ8R1M2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Gm13148-201ENSMUST00000118892 745 ntBASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.03■□□□□ 0.16
H2afjQ8R1M2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2afjQ8R1M2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2afjQ8R1M2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2afjQ8R1M2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
H2afjQ8R1M2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2afjQ8R1M2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
H2afjQ8R1M2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
H2afjQ8R1M2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
H2afjQ8R1M2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
H2afjQ8R1M2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afjQ8R1M2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H2afjQ8R1M2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.01■□□□□ 0.15
H2afjQ8R1M2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afjQ8R1M2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H2afjQ8R1M2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
H2afjQ8R1M2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afjQ8R1M2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.01■□□□□ 0.15
H2afjQ8R1M2 Gm37179-201ENSMUST00000194862 823 ntBASIC16.01■□□□□ 0.15
H2afjQ8R1M2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2afjQ8R1M2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms